Publications by authors named "Richard G Fitzjohn"

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SBMLtoOdin and Menelmacar: interactive visualisation of systems biology models for expert and non-expert audiences.
Leonie J Lorenz, Antoine Andréoletti, Tung V N Nguyen, Henning Hermjakob, Richard G FitzJohn

Bioinformatics· September 2025

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Author Correction: Epidemiological drivers of transmissibility and severity of SARS-CoV-2 in England.
Pablo N Perez-Guzman, Edward Knock, Natsuko Imai, Thomas Rawson, Cosmo Nazzareno Santoni, Richard G FitzJohn

Nat Commun· December 2023

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Epidemiological drivers of transmissibility and severity of SARS-CoV-2 in England.
Pablo N Perez-Guzman, Edward Knock, Natsuko Imai, Thomas Rawson, Cosmo Nazzareno Santoni, Richard G FitzJohn

Nat Commun· July 2023

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Quantifying the effect of delaying the second COVID-19 vaccine dose in England: a mathematical modelling study.
Natsuko Imai, Thomas Rawson, Edward S Knock, Raphael Sonabend, Yasin Elmaci, Richard G FitzJohn

Lancet Public Health· March 2023

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Non-pharmaceutical interventions, vaccination, and the SARS-CoV-2 delta variant in England: a mathematical modelling study.
Raphael Sonabend, Lilith K Whittles, Natsuko Imai, Pablo N Perez-Guzman, Edward S Knock, Richard G FitzJohn

Lancet· November 2021

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Naomi: a new modelling tool for estimating HIV epidemic indicators at the district level in sub-Saharan Africa.
Jeffrey W Eaton, Laura Dwyer-Lindgren, Steve Gutreuter, Megan O'Driscoll, Oliver Stevens, Richard G FitzJohn

J Int AIDS Soc· September 2021

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Emergent Shapes of Trait-Based Competition Functions from Resource-Based Models: A Gaussian Is Not Normal in Plant Communities.
Daniel S Falster, Georges Kunstler, Richard G FitzJohn, Mark Westoby

Am Nat· August 2021

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Key epidemiological drivers and impact of interventions in the 2020 SARS-CoV-2 epidemic in England.
Edward S Knock, Lilith K Whittles, John A Lees, Pablo N Perez-Guzman, Robert Verity, Richard G FitzJohn

Sci Transl Med· July 2021

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Reproducible parallel inference and simulation of stochastic state space models using odin, dust, and mcstate.
Richard G FitzJohn, Edward S Knock, Lilith K Whittles, Pablo N Perez-Guzman, Sangeeta Bhatia

Wellcome Open Res· June 2021

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Leveraging community mortality indicators to infer COVID-19 mortality and transmission dynamics in Damascus, Syria.
Oliver J Watson, Mervat Alhaffar, Zaki Mehchy, Charles Whittaker, Zack Akil, Richard G FitzJohn

Nat Commun· April 2021

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Reduction in mobility and COVID-19 transmission.
Pierre Nouvellet, Sangeeta Bhatia, Anne Cori, Kylie E C Ainslie, Marc Baguelin, Richard G FitzJohn

Nat Commun· February 2021

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Database of epidemic trends and control measures during the first wave of COVID-19 in mainland China.
Han Fu, Haowei Wang, Xiaoyue Xi, Adhiratha Boonyasiri, Yuanrong Wang, Richard G FitzJohn

Int J Infect Dis· January 2021

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State-level tracking of COVID-19 in the United States.
H Juliette T Unwin, Swapnil Mishra, Valerie C Bradley, Axel Gandy, Thomas A Mellan, Richard G FitzJohn

Nat Commun· December 2020

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Potential impact of the COVID-19 pandemic on HIV, tuberculosis, and malaria in low-income and middle-income countries: a modelling study.
Alexandra B Hogan, Britta L Jewell, Ellie Sherrard-Smith, Juan F Vesga, Oliver J Watson, Richard G FitzJohn

Lancet Glob Health· September 2020

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Anonymised and aggregated crowd level mobility data from mobile phones suggests that initial compliance with COVID-19 social distancing interventions was high and geographically consistent across the UK.
Benjamin Jeffrey, Caroline E Walters, Kylie E C Ainslie, Oliver Eales, Constanze Ciavarella, Richard G FitzJohn

Wellcome Open Res· July 2020

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Datastorr: a workflow and package for delivering successive versions of 'evolving data' directly into R.
Daniel S Falster, Richard G FitzJohn, Matthew W Pennell, William K Cornwell

Gigascience· May 2019

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Partitioning mortality into growth-dependent and growth-independent hazards across 203 tropical tree species.
James S Camac, Richard Condit, Richard G FitzJohn, Lachlan McCalman, Daniel Steinberg

Proc Natl Acad Sci U S A· December 2018

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How functional traits influence plant growth and shade tolerance across the life cycle.
Daniel S Falster, Remko A Duursma, Richard G FitzJohn

Proc Natl Acad Sci U S A· July 2018

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Shedding light on the 'dark side' of phylogenetic comparative methods.
Natalie Cooper, Gavin H Thomas, Richard G FitzJohn

Methods Ecol Evol· June 2016

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Conspecific density modulates the effect of predation on dispersal rates.
Edd Hammill, Richard G Fitzjohn, Diane S Srivastava

Oecologia· August 2015

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Model Adequacy and the Macroevolution of Angiosperm Functional Traits.
Matthew W Pennell, Richard G FitzJohn, William K Cornwell, Luke J Harmon

Am Nat· August 2015

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Corrigendum: Three keys to the radiation of angiosperms into freezing environments.
Amy E Zanne, David C Tank, William K Cornwell, Jonathan M Eastman, Stephen A Smith, Richard G FitzJohn

Nature· May 2015

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Zanne et al. reply.
Amy E Zanne, David C Tank, William K Cornwell, Jonathan M Eastman, Stephen A Smith, Richard G FitzJohn

Nature· May 2015

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The unsolved challenge to phylogenetic correlation tests for categorical characters.
Wayne P Maddison, Richard G FitzJohn

Syst Biol· January 2015

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