Publications by authors named "Richard Reeve"

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Local and wide-scale livestock movement networks inform disease control strategies in East Africa.
Divine Ekwem, Jessica Enright, J Grant C Hopcraft, Joram Buza, Gabriel Shirima, Richard Reeve

Sci Rep· June 2023

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A Bayesian approach to incorporate structural data into the mapping of genotype to antigenic phenotype of influenza A(H3N2) viruses.
William T Harvey, Vinny Davies, Rodney S Daniels, Lynne Whittaker, Victoria Gregory, Richard Reeve

PLoS Comput Biol· March 2023

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A large-scale genomic snapshot of Klebsiella spp. isolates in Northern Italy reveals limited transmission between clinical and non-clinical settings.
Harry A Thorpe, Ross Booton, Teemu Kallonen, Marjorie J Gibbon, Natacha Couto, Richard Reeve

Nat Microbiol· December 2022

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Visualization for epidemiological modelling: challenges, solutions, reflections and recommendations.
Jason Dykes, Alfie Abdul-Rahman, Daniel Archambault, Benjamin Bach, Rita Borgo, Richard Reeve

Philos Trans A Math Phys Eng Sci· October 2022

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FAIR data pipeline: provenance-driven data management for traceable scientific workflows.
Sonia Natalie Mitchell, Andrew Lahiff, Nathan Cummings, Jonathan Hollocombe, Bram Boskamp, Aaron Reeves, Richard Reeve

Philos Trans A Math Phys Eng Sci· October 2022

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Correction to: 'Visualization for epidemiological modelling: challenges, solutions, reflections and recommendations' (2022) by Dykes .
Jason Dykes, Alfie Abdul-Rahman, Daniel Archambault, Benjamin Bach, Rita Borgo, Richard Reeve

Philos Trans A Math Phys Eng Sci· October 2022

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The challenges of data in future pandemics.
Nigel Shadbolt, Alys Brett, Min Chen, Glenn Marion, Iain J McKendrick, Richard Reeve

Epidemics· September 2022

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Trends in the diversity of mortality causes and age-standardised mortality rates among subpopulations within Scotland, 2001-2019.
Ciaran McMonagle, Denise Brown, Richard Reeve, Rebecca Mancy

SSM Popul Health· September 2022

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Complex model calibration through emulation, a worked example for a stochastic epidemic model.
Michael Dunne, Hossein Mohammadi, Peter Challenor, Rita Borgo, Thibaud Porphyre, Richard Reeve

Epidemics· June 2022

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Livestock movement informs the risk of disease spread in traditional production systems in East Africa.
Divine Ekwem, Thomas A Morrison, Richard Reeve, Jessica Enright, Joram Buza

Sci Rep· August 2021

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SARS-CoV-2 variants, spike mutations and immune escape.
William T Harvey, Alessandro M Carabelli, Ben Jackson, Ravindra K Gupta, Emma C Thomson, Richard Reeve

Nat Rev Microbiol· July 2021

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The pitfalls and virtues of population genetic summary statistics: Detecting selective sweeps in recent divergences.
Kevin Schneider, Tom J White, Sonia Mitchell, Colin E Adams, Richard Reeve

J Evol Biol· June 2021

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Genetic determinants of receptor-binding preference and zoonotic potential of H9N2 avian influenza viruses.
Thomas P Peacock, Joshua E Sealy, William T Harvey, Donald J Benton, Richard Reeve

J Virol· March 2021

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Distemper, extinction, and vaccination of the Amur tiger.
Martin Gilbert, Nadezhda Sulikhan, Olga Uphyrkina, Mikhail Goncharuk, Linda Kerley, Richard Reeve

Proc Natl Acad Sci U S A· December 2020

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Genetic Basis of Antigenic Variation of SAT3 Foot-And-Mouth Disease Viruses in Southern Africa.
Lorens Maake, William T Harvey, Lia Rotherham, Pamela Opperman, Jacques Theron, Richard Reeve

Front Vet Sci· September 2020

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Uptake of Diagnostic Tests by Livestock Farmers: A Stochastic Game Theory Approach.
Sibylle Mohr, Rodney Beard, Alasdair J Nisbet, Stewart T G Burgess, Richard Reeve

Front Vet Sci· February 2020

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Estimation of temporal covariances in pathogen dynamics using Bayesian multivariate autoregressive models.
Colette Mair, Sema Nickbakhsh, Richard Reeve, Jim McMenamin, Arlene Reynolds

PLoS Comput Biol· December 2019

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Virus-virus interactions impact the population dynamics of influenza and the common cold.
Sema Nickbakhsh, Colette Mair, Louise Matthews, Richard Reeve, Paul C D Johnson

Proc Natl Acad Sci U S A· December 2019

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Enhancing livestock vaccination decision-making through rapid diagnostic testing.
Ashley F Railey, Felix Lankester, Tiziana Lembo, Richard Reeve, Gabriel Shirima

World Dev Perspect· December 2019

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1980s-2010s: The world's largest mangrove ecosystem is becoming homogeneous.
Swapan Kumar Sarker, Jason Matthiopoulos, Sonia N Mitchell, Zahir Uddin Ahmed, Md Bashirul Al Mamun, Richard Reeve

Biol Conserv· August 2019

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Improving the identification of antigenic sites in the H1N1 influenza virus through accounting for the experimental structure in a sparse hierarchical Bayesian model.
Vinny Davies, William T Harvey, Richard Reeve, Dirk Husmeier

J R Stat Soc Ser C Appl Stat· August 2019

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Divergent Allele Advantage Provides a Quantitative Model for Maintaining Alleles with a Wide Range of Intrinsic Merits.
Thorsten Stefan, Louise Matthews, Joaquin M Prada, Colette Mair, Richard Reeve

Genetics· June 2019

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Opportunities for enhanced surveillance of foot-and-mouth disease in endemic settings using milk samples.
Bryony Armson, Jemma Wadsworth, Tito Kibona, Deogratius Mshanga, Veronica L Fowler, Richard Reeve

Transbound Emerg Dis· May 2019

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Application of long read sequencing to determine expressed antigen diversity in Trypanosoma brucei infections.
Siddharth Jayaraman, Claire Harris, Edith Paxton, Anne-Marie Donachie, Heli Vaikkinen, Richard Reeve

PLoS Negl Trop Dis· April 2019

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The molecular basis of antigenic variation among A(H9N2) avian influenza viruses.
Thomas P Peacock, William T Harvey, Jean-Remy Sadeyen, Richard Reeve, Munir Iqbal

Emerg Microbes Infect· November 2018

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