Publications by authors named "Robert Bossy"

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MilkOligoCorpus: A semantically annotated resource for knowledge extraction on mammalian milk oligosaccharides.
Mathilde Rumeau, Marine Courtin, Robert Bossy, Clara Sauvion, Valentin Loux

PLoS One· August 2025

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MilkOligoThesaurus, a dataset of mammalian milk oligosaccharide synonyms.
Mathilde Rumeau, François Fenaille, Agnès Girard, Valentin Loux, Mouhamadou Ba, Robert Bossy

Data Brief· June 2024

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TaeC: A manually annotated text dataset for trait and phenotype extraction and entity linking in wheat breeding literature.
Claire Nédellec, Clara Sauvion, Robert Bossy, Mariya Borovikova, Louise Deléger

PLoS One· June 2024

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Combining different points of view on plant descriptions: mapping agricultural plant roles and biological taxa.
Florence Amardeilh, Sophie Aubin, Stephan Bernard, Sonia Bravo, Robert Bossy

Front Artif Intell· September 2023

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Omnicrobe, an open-access database of microbial habitats and phenotypes using a comprehensive text mining and data fusion approach.
Sandra Dérozier, Robert Bossy, Louise Deléger, Mouhamadou Ba, Estelle Chaix

PLoS One· January 2023

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Do syntactic trees enhance Bidirectional Encoder Representations from Transformers (BERT) models for chemical-drug relation extraction?
Anfu Tang, Louise Deléger, Robert Bossy, Pierre Zweigenbaum, Claire Nédellec

Database (Oxford)· August 2022

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C-Norm: a neural approach to few-shot entity normalization.
Arnaud Ferré, Louise Deléger, Robert Bossy, Pierre Zweigenbaum, Claire Nédellec

BMC Bioinformatics· December 2020

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WTO, an ontology for wheat traits and phenotypes in scientific publications.
Claire Nédellec, Liliana Ibanescu, Robert Bossy, Pierre Sourdille

Genomics Inform· June 2020

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Text mining tools for extracting information about microbial biodiversity in food.
Estelle Chaix, Louise Deléger, Robert Bossy, Claire Nédellec

Food Microbiol· August 2019

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Improving the CONTES method for normalizing biomedical text entities with concepts from an ontology with (almost) no training data.
Arnaud Ferré, Mouhamadou Ba, Robert Bossy

Genomics Inform· June 2019

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Text mining resources for the life sciences.
Piotr Przybyła, Matthew Shardlow, Sophie Aubin, Robert Bossy, Richard Eckart de Castilho

Database (Oxford)· November 2017

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Overview of the gene regulation network and the bacteria biotope tasks in BioNLP'13 shared task.
Robert Bossy, Wiktoria Golik, Zorana Ratkovic, Dialekti Valsamou, Philippe Bessières

BMC Bioinformatics· February 2016

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BioNLP Shared Task--The Bacteria Track.
Robert Bossy, Julien Jourde, Alain-Pierre Manine, Philippe Veber, Erick Alphonse

BMC Bioinformatics· June 2012

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Complete genome sequence of the fish pathogen Flavobacterium psychrophilum.
Eric Duchaud, Mekki Boussaha, Valentin Loux, Jean-François Bernardet, Christian Michel, Robert Bossy

Nat Biotechnol· July 2007

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The complete genome sequence of the meat-borne lactic acid bacterium Lactobacillus sakei 23K.
Stéphane Chaillou, Marie-Christine Champomier-Vergès, Monique Cornet, Anne-Marie Crutz-Le Coq, Anne-Marie Dudez, Robert Bossy

Nat Biotechnol· December 2005

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