Publications by authors named "Robyn Lee"

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Transmission of carbapenemase-producing Enterobacter in Ontario, Canada: A Retrospective Genomic Analysis.
Conrad Izydorczyk, Robyn Lee, Laura Mataseje, George R Golding, Thomas A Edge

Emerg Microbes Infect· November 2025

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Genomic Epidemiology of Mycobacterium abscessus on the Island of Montréal Is Not Suggestive of Health Care-Associated Person-to-Person Transmission.
Idowu B Olawoye, Nicholas Waglechner, Fiona McIntosh, Pierre-Marie Akochy, Nancy Cloutier, Robyn S Lee

J Infect Dis· February 2025

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Developing best practice public health standards for whole genome sequencing of .
Justin T Denholm, Marcel A Behr, Gerard de Vries, Richard Anthony, Esther Robinson, Robyn Lee

Lancet Reg Health West Pac· May 2024

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The association between phylogenetic lineage and the subclinical phenotype of pulmonary tuberculosis: A retrospective 2-cohort study.
Richard Long, Matthew Croxen, Robyn Lee, Alexander Doroshenko, Angela Lau

J Infect· February 2024

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Inferring bacterial transmission dynamics using deep sequencing genomic surveillance data.
Madikay Senghore, Hannah Read, Priyali Oza, Sarah Johnson, Hemanoel Passarelli-Araujo, Robyn Lee

Nat Commun· October 2023

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SARS-CoV-2 Outbreak Investigation Using Contact Tracing and Whole-Genome Sequencing in an Ontario Tertiary Care Hospital.
Kara K Tsang, Shehryar Ahmad, Alanoud Aljarbou, Mohammed Al Salem, Sheridan J C Baker, Jalees A Nasir, Robyn S Lee

Microbiol Spectr· June 2023

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Insight into the regulatory networks underlying the high lipid perennial ryegrass growth under different irradiances.
Somrutai Winichayakul, Richard Macknight, Liam Le Lievre, Zac Beechey-Gradwell, Robyn Lee

PLoS One· October 2022

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Genomic epidemiology of Mycobacterium abscessus in a Canadian cystic fibrosis centre.
Nicholas Waglechner, Elizabeth Tullis, Anne L Stephenson, Valerie Waters, Fiona McIntosh, Robyn S Lee

Sci Rep· September 2022

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Estimation of the generation interval using pairwise relative transmission probabilities.
Sarah V Leavitt, Helen E Jenkins, Paola Sebastiani, Robyn S Lee, C Robert Horsburgh

Biostatistics· July 2022

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Multi-site implementation of whole genome sequencing for hospital infection control: A prospective genomic epidemiological analysis.
Norelle L Sherry, Claire L Gorrie, Jason C Kwong, Charlie Higgs, Rhonda L Stuart, Robyn S Lee

Lancet Reg Health West Pac· June 2022

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A novel TFL1 gene induces flowering in the mast seeding alpine snow tussock, Chionochloa pallens (Poaceae).
Samarth, Robyn Lee, Dave Kelly, Matthew H Turnbull, Richard Macknight

Mol Ecol· February 2022

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What Can Genetic Relatedness Tell Us About Risk Factors for Tuberculosis Transmission?
Sarah V Leavitt, C Robert Horsburgh, Robyn S Lee, Andrew M Tibbs, Laura F White

Epidemiology· January 2022

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Molecular Epidemiology of Mycobacterium tuberculosis To Describe the Transmission Dynamics Among Inuit Residing in Iqaluit Nunavut Using Whole-Genome Sequencing.
Gonzalo G Alvarez, Alice A Zwerling, Carla Duncan, Christopher Pease, Deborah Van Dyk, Robyn S Lee

Clin Infect Dis· June 2021

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Pilot study of a combined genomic and epidemiologic surveillance program for hospital-acquired multidrug-resistant pathogens across multiple hospital networks in Australia.
Norelle L Sherry, Robyn S Lee, Claire L Gorrie, Jason C Kwong, Rhonda L Stuart

Infect Control Hosp Epidemiol· May 2021

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Molecular control of the floral transition in the mast seeding plant Celmisia lyallii (Asteraceae).
Samarth, Robyn Lee, Dave Kelly, Matthew H Turnbull, Richard C Macknight

Mol Ecol· April 2021

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Reporting practices for genomic epidemiology of tuberculosis: a systematic review of the literature using STROME-ID guidelines as a benchmark.
Brianna Cheng, Marcel A Behr, Benjamin P Howden, Theodore Cohen, Robyn S Lee

Lancet Microbe· March 2021

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Estimating the relative probability of direct transmission between infectious disease patients.
Sarah V Leavitt, Robyn S Lee, Paola Sebastiani, C Robert Horsburgh, Helen E Jenkins

Int J Epidemiol· June 2020

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Reproducibility in science: important or incremental?
Robyn S Lee, William P Hanage

Lancet Microbe· June 2020

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Using Genetic Distance from Archived Samples for the Prediction of Antibiotic Resistance in .
Derek R MacFadden, Bryan Coburn, Karel Břinda, Antoine Corbeil, Nick Daneman, Robyn S Lee

Antimicrob Agents Chemother· April 2020

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Identification of flowering-time genes in mast flowering plants using De Novo transcriptomic analysis.
Samarth, Robyn Lee, Jiancheng Song, Richard C Macknight, Paula E Jameson

PLoS One· March 2020

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Rapid inference of antibiotic resistance and susceptibility by genomic neighbour typing.
Karel Břinda, Alanna Callendrello, Kevin C Ma, Derek R MacFadden, Themoula Charalampous, Robyn S Lee

Nat Microbiol· March 2020

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Previously undetected super-spreading of revealed by deep sequencing.
Robyn S Lee, Jean-François Proulx, Fiona McIntosh, Marcel A Behr, William P Hanage

Elife· February 2020

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Molecular Characterisation of a Supergene Conditioning Super-High Vitamin C in Kiwifruit Hybrids.
John McCallum, William Laing, Sean Bulley, Susan Thomson, Andrew Catanach, Robyn Lee

Plants (Basel)· July 2019

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Beta-Lactam/Beta-Lactamase Inhibitor Therapy for Potential AmpC-Producing Organisms: A Systematic Review and Meta-Analysis.
Matthew P Cheng, Robyn S Lee, Alexandre P Cheng, Samuel De L'étoile-Morel, Koray Demir, Todd C Lee

Open Forum Infect Dis· July 2019

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Multiple exposures, reinfection and risk of progression to active tuberculosis.
Sarah F Ackley, Robyn S Lee, Lee Worden, Erin Zwick, Travis C Porco

R Soc Open Sci· March 2019

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