Publications by authors named "Ron Kagan"

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HIV-1 Drug Resistance Trends in the Era of Modern Antiretrovirals: 2018-2024.
Ron M Kagan, John D Baxter, Taekkyun Kim, Elizabeth M Marlowe

Open Forum Infect Dis· August 2025

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Epidemiological Burden of Hepatitis Delta Virus in the United States.
Elizabeth M Marlowe, Brooke E Swanson, Susan E Realegeno, William A Meyer, Robert Gish, Ron M Kagan

J Viral Hepat· June 2025

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Identification of Human Monkeypox Virus Genome Deletions That Impact Diagnostic Assays.
Jacob M Garrigues, Peera Hemarajata, Briar Lucero, Jemma Alarcón, Heidi Ransohoff, Ron M Kagan

J Clin Microbiol· December 2022

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Rapid and Accurate Identification of SARS-CoV-2 Variants Using Real Time PCR Assays.
Gwynngelle A Borillo, Ron M Kagan, Elizabeth M Marlowe

Front Cell Infect Microbiol· May 2022

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Development and validation of a high throughput SARS-CoV-2 whole genome sequencing workflow in a clinical laboratory.
Sun Hee Rosenthal, Anna Gerasimova, Rolando Ruiz-Vega, Kayla Livingston, Ron M Kagan

Sci Rep· February 2022

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Performance of Unobserved Self-Collected Nasal Swabs for Detection of SARS-CoV-2 by RT-PCR Utilizing a Remote Specimen Collection Strategy.
Ron M Kagan, Amy A Rogers, Gwynngelle A Borillo, Nigel J Clarke, Elizabeth M Marlowe

Open Forum Infect Dis· April 2021

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Pooling of Upper Respiratory Specimens Using a SARS-CoV-2 Real-time RT-PCR Assay Authorized for Emergency Use in Low-Prevalence Populations for High-Throughput Testing.
Gwynngelle A Borillo, Ron M Kagan, Russell E Baumann, Boris M Fainstein, Lamela Umaru

Open Forum Infect Dis· November 2020

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Evaluation of Transport Media and Specimen Transport Conditions for the Detection of SARS-CoV-2 by Use of Real-Time Reverse Transcription-PCR.
Amy A Rogers, Russell E Baumann, Gwynngelle A Borillo, Ron M Kagan, Hollis J Batterman

J Clin Microbiol· July 2020

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Trends in HIV-1 Drug Resistance Mutations from a U.S. Reference Laboratory from 2006 to 2017.
Ron M Kagan, Keith J Dunn, Gregg P Snell, Richard E Nettles, Harvey W Kaufman

AIDS Res Hum Retroviruses· August 2019

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What Is the Future for Zoos and Aquariums?
Ron Kagan, Stephanie Allard, Scott Carter

J Appl Anim Welf Sci· December 2018

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Detailed Transmission Network Analysis of a Large Opiate-Driven Outbreak of HIV Infection in the United States.
Ellsworth M Campbell, Hongwei Jia, Anupama Shankar, Debra Hanson, Wei Luo, Ron M Kagan

J Infect Dis· November 2017

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A Universal Animal Welfare Framework for Zoos.
Ron Kagan, Scott Carter, Stephanie Allard

J Appl Anim Welf Sci· August 2016

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Antiretroviral Drug Resistance Among Children and Youth in the United States With Perinatal HIV.
Russell B Van Dyke, Kunjal Patel, Ron M Kagan, Brad Karalius, Shirley Traite

Clin Infect Dis· July 2016

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Determination of HIV-1 coreceptor tropism using proviral DNA in women before and after viral suppression.
Russell E Baumann, Amy A Rogers, Hasnah B Hamdan, Harold Burger, Barbara Weiser, Ron M Kagan

AIDS Res Ther· April 2015

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A genotypic HIV-1 proviral DNA coreceptor tropism assay: characterization in viremic subjects.
Jennifer Brown, Harold Burger, Barbara Weiser, Richard B Pollard, Xiao-Dong Li, Ron M Kagan

AIDS Res Ther· June 2014

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Comparison of genotypic and phenotypic HIV type 1 tropism assay: results from the screening samples of Cenicriviroc Study 202, a randomized phase II trial in treatment-naive subjects.
Ron M Kagan, Erik P Johnson, Martin F Siaw, Ben Van Baelen, Richard Ogden

AIDS Res Hum Retroviruses· February 2014

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Non-nucleoside reverse transcriptase inhibitor (NNRTI) cross-resistance: implications for preclinical evaluation of novel NNRTIs and clinical genotypic resistance testing.
George L Melikian, Soo-Yon Rhee, Vici Varghese, Danielle Porter, Kirsten White, Ron Kagan

J Antimicrob Chemother· January 2014

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A genotypic test for HIV-1 tropism combining Sanger sequencing with ultradeep sequencing predicts virologic response in treatment-experienced patients.
Ron M Kagan, Erik P Johnson, Martin Siaw, Pinaki Biswas, Douglass S Chapman

PLoS One· February 2013

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Standardized comparison of the relative impacts of HIV-1 reverse transcriptase (RT) mutations on nucleoside RT inhibitor susceptibility.
George L Melikian, Soo-Yon Rhee, Jonathan Taylor, W Jeffrey Fessel, David Kaufman, Ron Kagan

Antimicrob Agents Chemother· May 2012

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Hepatitis B virus reverse transcriptase sequence variant database for sequence analysis and mutation discovery.
Soo-Yon Rhee, Severine Margeridon-Thermet, Mindie H Nguyen, Tommy F Liu, Ron M Kagan

Antiviral Res· December 2010

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Molecular characterization of clinical isolates of human immunodeficiency virus resistant to the protease inhibitor darunavir.
Klára Grantz Sasková, Milan Kozísek, Pavlína Rezácová, Jirí Brynda, Tatyana Yashina, Ron M Kagan

J Virol· September 2009

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Failure of treatment with first-line lopinavir boosted with ritonavir can be explained by novel resistance pathways with protease mutation 76V.
Monique Nijhuis, Annemarie M J Wensing, Wouter F W Bierman, Dorien de Jong, Ron Kagan

J Infect Dis· September 2009

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Additional HIV-1 mutation patterns associated with reduced phenotypic susceptibility to etravirine in clinical samples.
Ron M Kagan, Prakash Sista, Theresa Pattery, Lee Bacheler, Dale A Schwab

AIDS· July 2009

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Human immunodeficiency virus type 1 isolates with the reverse transcriptase (RT) mutation Q145M retain nucleoside and nonnucleoside RT inhibitor susceptibility.
Vici Varghese, Yumi Mitsuya, Rajin Shahriar, Michael H Bachmann, W Jeffrey Fessel, Ron M Kagan

Antimicrob Agents Chemother· May 2009

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Enzymatic and structural analysis of the I47A mutation contributing to the reduced susceptibility to HIV protease inhibitor lopinavir.
Klára Grantz Sasková, Milan Kozísek, Martin Lepsík, Jirí Brynda, Pavlína Rezácová, Ron M Kagan

Protein Sci· September 2008

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