Publications by authors named "Ronald Coifman"

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Gene trajectory inference for single-cell data by optimal transport metrics.
Rihao Qu, Xiuyuan Cheng, Esen Sefik, Jay S Stanley Iii, Boris Landa, Ronald Coifman

Nat Biotechnol· February 2025

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From disorganized data to emergent dynamic models: Questionnaires to partial differential equations.
David W Sroczynski, Felix P Kemeth, Anastasia S Georgiou, Ronald R Coifman, Ioannis G Kevrekidis

PNAS Nexus· February 2025

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On learning what to learn: Heterogeneous observations of dynamics and establishing possibly causal relations among them.
David W Sroczynski, Felix Dietrich, Eleni D Koronaki, Ronen Talmon, Ronald R Coifman

PNAS Nexus· December 2024

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Estimating Position-Dependent and Anisotropic Diffusivity Tensors from Molecular Dynamics Trajectories: Existing Methods and Future Outlook.
Tiago S Domingues, Ronald Coifman, Amir Haji-Akbari

J Chem Theory Comput· June 2024

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Rapid fluctuations in functional connectivity of cortical networks encode spontaneous behavior.
Hadas Benisty, Daniel Barson, Andrew H Moberly, Sweyta Lohani, Lan Tang, Ronald R Coifman

Nat Neurosci· January 2024

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Robust Estimation of Position-Dependent Anisotropic Diffusivity Tensors from Molecular Dynamics Trajectories.
Tiago S Domingues, Ronald R Coifman, Amir Haji-Akbari

J Phys Chem B· October 2023

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Robust Estimation of Position-Dependent Anisotropic Diffusivity Tensors from Stochastic Trajectories.
Tiago S Domingues, Ronald R Coifman, Amir Haji-Akbari

J Phys Chem B· June 2023

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Doubly Stochastic Normalization of the Gaussian Kernel Is Robust to Heteroskedastic Noise.
Boris Landa, Ronald R Coifman, Yuval Kluger

SIAM J Math Data Sci· March 2021

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Diffusion Earth Mover's Distance and Distribution Embeddings.
Alexander Tong, Guillaume Huguet, Amine Natik, Kincaid MacDonald, Manik Kuchroo, Ronald Coifman

ArXiv· February 2021

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Local conformal autoencoder for standardized data coordinates.
Erez Peterfreund, Ofir Lindenbaum, Felix Dietrich, Tom Bertalan, Matan Gavish, Ronald R Coifman

Proc Natl Acad Sci U S A· December 2020

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Two-sample statistics based on anisotropic kernels.
Xiuyuan Cheng, Alexander Cloninger, Ronald R Coifman

Inf inference· September 2020

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Author Correction: Visualizing structure and transitions in high-dimensional biological data.
Kevin R Moon, David van Dijk, Zheng Wang, Scott Gigante, Daniel B Burkhardt, Ronald R Coifman

Nat Biotechnol· January 2020

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Visualizing structure and transitions in high-dimensional biological data.
Kevin R Moon, David van Dijk, Zheng Wang, Scott Gigante, Daniel B Burkhardt, Ronald R Coifman

Nat Biotechnol· December 2019

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A REMARK ON THE ARCSINE DISTRIBUTION AND THE HILBERT TRANSFORM.
Ronald R Coifman, Stefan Steinerberger

J Fourier Anal Appl· October 2019

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Data-Driven Tree Transforms and Metrics.
Gal Mishne, Ronen Talmon, Israel Cohen, Ronald R Coifman, Yuval Kluger

IEEE Trans Signal Inf Process Netw· September 2018

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Describing the performance of U.S. hospitals by applying big data analytics.
Nicholas S Downing, Alexander Cloninger, Arjun K Venkatesh, Angela Hsieh, Elizabeth E Drye, Ronald R Coifman

PLoS One· September 2017

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Reconstruction of normal forms by learning informed observation geometries from data.
Or Yair, Ronen Talmon, Ronald R Coifman, Ioannis G Kevrekidis

Proc Natl Acad Sci U S A· September 2017

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Heterogeneity in Early Responses in ALLHAT (Antihypertensive and Lipid-Lowering Treatment to Prevent Heart Attack Trial).
Sanket S Dhruva, Chenxi Huang, Erica S Spatz, Andreas C Coppi, Frederick Warner, Ronald R Coifman

Hypertension· July 2017

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Intrinsic map dynamics exploration for uncharted effective free-energy landscapes.
Eliodoro Chiavazzo, Roberto Covino, Ronald R Coifman, C William Gear, Anastasia S Georgiou

Proc Natl Acad Sci U S A· July 2017

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Quantitative arbor analytics: unsupervised harmonic co-clustering of populations of brain cell arbors based on L-measure.
Yanbin Lu, Lawrence Carin, Ronald Coifman, William Shain, Badrinath Roysam

Neuroinformatics· January 2015

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Reply to about the electrophysiological basis of resting state networks.
Dominique Duncan, Robert B Duckrow, Steven M Pincus, Irina Goncharova, Lawrence J Hirsch, Ronald R Coifman

Clin Neurophysiol· August 2014

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Diffusion methods for aligning medical datasets: location prediction in CT scan images.
Ángela Fernández, Neta Rabin, Ronald R Coifman, Joseph Eckstein

Med Image Anal· February 2014

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Nonlinear intrinsic variables and state reconstruction in multiscale simulations.
Carmeline J Dsilva, Ronen Talmon, Neta Rabin, Ronald R Coifman, Ioannis G Kevrekidis

J Chem Phys· November 2013

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Empirical intrinsic geometry for nonlinear modeling and time series filtering.
Ronen Talmon, Ronald R Coifman

Proc Natl Acad Sci U S A· July 2013

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Identifying preseizure state in intracranial EEG data using diffusion kernels.
Dominique Duncan, Ronen Talmon, Hitten P Zaveri, Ronald R Coifman

Math Biosci Eng· June 2013

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