Publications by authors named "Ronald Jansen"

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Total ancestry measure: quantifying the similarity in tree-like classification, with genomic applications.
Haiyuan Yu, Ronald Jansen, Gustavo Stolovitzky, Mark Gerstein

Bioinformatics· August 2007

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Signal processing in the TGF-beta superfamily ligand-receptor network.
Jose M G Vilar, Ronald Jansen, Chris Sander

PLoS Comput Biol· January 2006

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Penny and pound wise: pharmacoeconomics from a governmental perspective.
Mike F van Oostenbruggen, Ronald B Jansen, Katja Mur, Huib Kooijman

Pharmacoeconomics· July 2005

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Analyzing cellular biochemistry in terms of molecular networks.
Yu Xia, Haiyuan Yu, Ronald Jansen, Michael Seringhaus, Sarah Baxter

Annu Rev Biochem· October 2004

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Analyzing protein function on a genomic scale: the importance of gold-standard positives and negatives for network prediction.
Ronald Jansen, Mark Gerstein

Curr Opin Microbiol· October 2004

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Information assessment on predicting protein-protein interactions.
Nan Lin, Baolin Wu, Ronald Jansen, Mark Gerstein, Hongyu Zhao

BMC Bioinformatics· October 2004

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Tools and databases to analyze protein flexibility; approaches to mapping implied features onto sequences.
W G Krebs, J Tsai, Vadim Alexandrov, Jochen Junker, Ronald Jansen

Methods Enzymol· February 2004

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Bridging structural biology and genomics: assessing protein interaction data with known complexes.
Aled M Edwards, Bart Kus, Ronald Jansen, Dov Greenbaum, Jack Greenblatt

Drug Discov Today· January 2004

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A Bayesian networks approach for predicting protein-protein interactions from genomic data.
Ronald Jansen, Haiyuan Yu, Dov Greenbaum, Yuval Kluger, Nevan J Krogan

Science· October 2003

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Integration of genomic datasets to predict protein complexes in yeast.
Ronald Jansen, Ning Lan, Jiang Qian, Mark Gerstein

J Struct Funct Genomics· August 2003

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Revisiting the codon adaptation index from a whole-genome perspective: analyzing the relationship between gene expression and codon occurrence in yeast using a variety of models.
Ronald Jansen, Harmen J Bussemaker, Mark Gerstein

Nucleic Acids Res· April 2003

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Systematic learning of gene functional classes from DNA array expression data by using multilayer perceptrons.
Alvaro Mateos, Joaquín Dopazo, Ronald Jansen, Yuhai Tu, Mark Gerstein

Genome Res· November 2002

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Bridging structural biology and genomics: assessing protein interaction data with known complexes.
Aled M Edwards, Bart Kus, Ronald Jansen, Dov Greenbaum, Jack Greenblatt

Trends Genet· October 2002

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Analysis of mRNA expression and protein abundance data: an approach for the comparison of the enrichment of features in the cellular population of proteins and transcripts.
Dov Greenbaum, Ronald Jansen, Mark Gerstein

Bioinformatics· April 2002

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Subcellular localization of the yeast proteome.
Anuj Kumar, Seema Agarwal, John A Heyman, Sandra Matson, Matthew Heidtman, Ronald Jansen

Genes Dev· March 2002

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Relating whole-genome expression data with protein-protein interactions.
Ronald Jansen, Dov Greenbaum, Mark Gerstein

Genome Res· January 2002

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Proteomics. Integrating interactomes.
Mark Gerstein, Ning Lan, Ronald Jansen

Science· January 2002

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