Publications by authors named "Roy D Welch"

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Genetic and environmental determinants of streaming and aggregation in Myxococcus xanthus.
Trosporsha T Khan, Patrick Murphy, Jiangguo Zhang, Oleg A Igoshin, Roy D Welch

Sci Rep· August 2025

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Mechanobiology as a tool for addressing the genotype-to-phenotype problem in microbiology.
Merrill E Asp, Minh-Tri Ho Thanh, Subarna Dutta, Jessica A Comstock, Roy D Welch

Biophys Rev (Melville)· June 2023

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Identifying the Gene Regulatory Network of the Starvation-Induced Transcriptional Activator Nla28.
Muqing Ma, Anthony G Garza, David J Lemon, Eduardo A Caro, Linnea Ritchie, Roy D Welch

J Bacteriol· December 2022

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Spreading rates of bacterial colonies depend on substrate stiffness and permeability.
Merrill E Asp, Minh-Tri Ho Thanh, Danielle A Germann, Robert J Carroll, Alana Franceski, Roy D Welch

PNAS Nexus· March 2022

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Profiling Swarming Phenotypes through Mutation and Environmental Variation.
Linnea J Ritchie, Erin R Curtis, Kimberly A Murphy, Roy D Welch

J Bacteriol· November 2021

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Quantification of Aggregation and Rippling Behaviors: Deep-Learning Transformation of Phase-Contrast into Fluorescence Microscopy Images.
Jiangguo Zhang, Jessica A Comstock, Christopher R Cotter, Patrick A Murphy, Weili Nie, Roy D Welch

Microorganisms· September 2021

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The σ system directly regulates bacterial natural product genes.
Muqing Ma, Roy D Welch, Anthony G Garza

Sci Rep· February 2021

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Self-Driven Phase Transitions Drive Myxococcus xanthus Fruiting Body Formation.
Guannan Liu, Adam Patch, Fatmagül Bahar, David Yllanes, Roy D Welch

Phys Rev Lett· June 2019

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Inter-laboratory evolution of a model organism and its epistatic effects on mutagenesis screens.
Michael D Bradley, Devin Neu, Fatmagul Bahar, Roy D Welch

Sci Rep· December 2016

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Describing Myxococcus xanthus aggregation using Ostwald ripening equations for thin liquid films.
Fatmagül Bahar, Philip C Pratt-Szeliga, Stuart Angus, Jiaye Guo, Roy D Welch

Sci Rep· September 2014

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Phenotypic profiling of ABC transporter coding genes in Myxococcus xanthus.
Jinyuan Yan, Michael D Bradley, Jannice Friedman, Roy D Welch

Front Microbiol· August 2014

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A Markovian analysis of bacterial genome sequence constraints.
Aaron D Skewes, Roy D Welch

PeerJ· September 2013

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The entomopathogenic bacterial endosymbionts Xenorhabdus and Photorhabdus: convergent lifestyles from divergent genomes.
John M Chaston, Garret Suen, Sarah L Tucker, Aaron W Andersen, Archna Bhasin, Roy D Welch

PLoS One· April 2012

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A Clp/Hsp100 chaperone functions in Myxococcus xanthus sporulation and self-organization.
Jinyuan Yan, Anthony G Garza, Michael D Bradley, Roy D Welch

J Bacteriol· April 2012

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Xanthusbase after five years expands to become Openmods.
Philip C Pratt-Szeliga, Aaron D Skewes, Jinyuan Yan, Laura G Welch, Roy D Welch

Nucleic Acids Res· January 2012

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Quantifying aggregation dynamics during Myxococcus xanthus development.
Haiyang Zhang, Stuart Angus, Michael Tran, Chunyan Xie, Oleg A Igoshin, Roy D Welch

J Bacteriol· October 2011

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Recording multicellular behavior in Myxococcus xanthus biofilms using time-lapse microcinematography.
Rion G Taylor, Roy D Welch

J Vis Exp· August 2010

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Chemotaxis as an emergent property of a swarm.
Rion G Taylor, Roy D Welch

J Bacteriol· October 2008

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The emerging world of wikis.
James C Hu, Rodolfo Aramayo, Dan Bolser, Tyrrell Conway, Christine G Elsik, Roy D Welch

Science· June 2008

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Practical applications of bacterial functional genomics.
Garret Suen, Bradley I Arshinoff, Rion G Taylor, Roy D Welch

Biotechnol Genet Eng Rev· January 2008

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Spatial organization of Myxococcus xanthus during fruiting body formation.
Patrick D Curtis, Rion G Taylor, Roy D Welch, Lawrence J Shimkets

J Bacteriol· December 2007

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Complete genome sequence of the myxobacterium Sorangium cellulosum.
Susanne Schneiker, Olena Perlova, Olaf Kaiser, Klaus Gerth, Aysel Alici, Roy D Welch

Nat Biotechnol· November 2007

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Predicting prokaryotic ecological niches using genome sequence analysis.
Garret Suen, Barry S Goldman, Roy D Welch

PLoS One· August 2007

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Xanthusbase: adapting wikipedia principles to a model organism database.
Bradley I Arshinoff, Garret Suen, Eric M Just, Sohel M Merchant, Warren A Kibbe, Roy D Welch

Nucleic Acids Res· January 2007

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Bacterial postgenomics: the promise and peril of systems biology.
Garret Suen, Jimmy S Jakobsen, Barry S Goldman, Mitchell Singer, Anthony G Garza, Roy D Welch

J Bacteriol· December 2006

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