Publications by authors named "Rune Linding"

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Retraction Note: The hypoxic cancer secretome induces pre-metastatic bone lesions through lysyl oxidase.
Thomas R Cox, Robin M H Rumney, Erwin M Schoof, Lara Perryman, Anette M Høye, Rune Linding

Nature· May 2023

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An atlas of substrate specificities for the human serine/threonine kinome.
Jared L Johnson, Tomer M Yaron, Emily M Huntsman, Alexander Kerelsky, Junho Song, Rune Linding

Nature· January 2023

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Control of COVID-19 Outbreaks under Stochastic Community Dynamics, Bimodality, or Limited Vaccination.
Björn Goldenbogen, Stephan O Adler, Oliver Bodeit, Judith A H Wodke, Ximena Escalera-Fanjul, Rune Linding

Adv Sci (Weinh)· August 2022

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Deep Hidden Physics Modeling of Cell Signaling Networks.
Martin Seeger, James Longden, Edda Klipp, Rune Linding

Curr Genomics· December 2021

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NODAL/TGFβ signalling mediates the self-sustained stemness induced by PIK3CAH1047R homozygosity in pluripotent stem cells.
Ralitsa R Madsen, James Longden, Rachel G Knox, Xavier Robin, Franziska Völlmy, Rune Linding

Dis Model Mech· March 2021

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Deep neural networks identify signaling mechanisms of ErbB-family drug resistance from a continuous cell morphology space.
James Longden, Xavier Robin, Mathias Engel, Jesper Ferkinghoff-Borg, Ida Kjær, Rune Linding

Cell Rep· January 2021

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Global view of the RAF-MEK-ERK module and its immediate downstream effectors.
Cristina C Santini, James Longden, Erwin M Schoof, Craig D Simpson, Grace R Jeschke, Rune Linding

Sci Rep· July 2019

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Comprehensive substrate specificity profiling of the human Nek kinome reveals unexpected signaling outputs.
Bert van de Kooij, Pau Creixell, Anne van Vlimmeren, Brian A Joughin, Chad J Miller, Rune Linding

Elife· May 2019

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Comprehensive profiling of the STE20 kinase family defines features essential for selective substrate targeting and signaling output.
Chad J Miller, Hua Jane Lou, Craig Simpson, Bert van de Kooij, Byung Hak Ha, Rune Linding

PLoS Biol· March 2019

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Unravelling the GSK3β-related genotypic interaction network influencing hippocampal volume in recurrent major depressive disorder.
Becky Inkster, Andy Simmons, James H Cole, Erwin Schoof, Rune Linding

Psychiatr Genet· October 2018

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Farnesylated heat shock protein 40 is a component of membrane-bound RISC in .
Lars Sjögren, Maïna Floris, Andrea Barghetti, Franziska Völlmy, Rune Linding

J Biol Chem· October 2018

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Bowhead: Bayesian modelling of cell velocity during concerted cell migration.
Mathias Engel, James Longden, Jesper Ferkinghoff-Borg, Xavier Robin, Gaye Saginc, Rune Linding

PLoS Comput Biol· January 2018

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Cancer systems biology: Harnessing off-target effects.
Gaye Saginc, Franziska Voellmy, Rune Linding

Nat Chem Biol· November 2017

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Dynamic Rearrangement of Cell States Detected by Systematic Screening of Sequential Anticancer Treatments.
Simon Koplev, James Longden, Jesper Ferkinghoff-Borg, Mathias Blicher Bjerregård, Thomas R Cox, Rune Linding

Cell Rep· September 2017

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Dataset for the proteomic inventory and quantitative analysis of the breast cancer hypoxic secretome associated with osteotropism.
Thomas R Cox, Erwin M Schoof, Alison Gartland, Janine T Erler, Rune Linding

Data Brief· December 2015

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Kinome-wide decoding of network-attacking mutations rewiring cancer signaling.
Pau Creixell, Erwin M Schoof, Craig D Simpson, James Longden, Chad J Miller, Rune Linding

Cell· September 2015

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Unmasking determinants of specificity in the human kinome.
Pau Creixell, Antonio Palmeri, Chad J Miller, Hua Jane Lou, Cristina C Santini, Rune Linding

Cell· September 2015

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Pathway and network analysis of cancer genomes.
Pau Creixell, Jüri Reimand, Syed Haider, Guanming Wu, Tatsuhiro Shibata, Rune Linding

Nat Methods· July 2015

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The hypoxic cancer secretome induces pre-metastatic bone lesions through lysyl oxidase.
Thomas R Cox, Robin M H Rumney, Erwin M Schoof, Lara Perryman, Anette M Høye, Rune Linding

Nature· June 2015

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Integrative analysis of kinase networks in TRAIL-induced apoptosis provides a source of potential targets for combination therapy.
Jonathan So, Adrian Pasculescu, Anna Y Dai, Kelly Williton, Andrew James, Rune Linding

Sci Signal· April 2015

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Modulation of the chromatin phosphoproteome by the Haspin protein kinase.
Alessio Maiolica, Maria de Medina-Redondo, Erwin M Schoof, Apirat Chaikuad, Fabrizio Villa, Rune Linding

Mol Cell Proteomics· July 2014

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KinomeXplorer: an integrated platform for kinome biology studies.
Heiko Horn, Erwin M Schoof, Jinho Kim, Xavier Robin, Martin L Miller, Rune Linding

Nat Methods· June 2014

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Identification of hypoxia-regulated proteins using MALDI-mass spectrometry imaging combined with quantitative proteomics.
Marie-Claude Djidja, Joan Chang, Andreas Hadjiprocopis, Fabian Schmich, John Sinclair, Rune Linding

J Proteome Res· May 2014

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CoreFlow: a computational platform for integration, analysis and modeling of complex biological data.
Adrian Pasculescu, Erwin M Schoof, Pau Creixell, Yong Zheng, Marina Olhovsky, Rune Linding

J Proteomics· April 2014

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Experimental and computational tools for analysis of signaling networks in primary cells.
Erwin M Schoof, Rune Linding

Curr Protoc Immunol· February 2014

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