Publications by authors named "Runyan Liu"

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DBP: Adaptive and Interpretable Factor Analysis for Single-cell RNA-seq Data with Deep Beta Processes.
Runyan Liu, Shuofeng Hu, Guohua Dong, Tongtong Kan, Jinhui Shi

Genomics Proteomics Bioinformatics· November 2025

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Mosaic integration and knowledge transfer of single-cell multimodal data with MIDAS.
Zhen He, Shuofeng Hu, Yaowen Chen, Sijing An, Jiahao Zhou, Runyan Liu

Nat Biotechnol· October 2024

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scDAC: deep adaptive clustering of single-cell transcriptomic data with coupled autoencoder and Dirichlet process mixture model.
Sijing An, Jinhui Shi, Runyan Liu, Yaowen Chen, Jing Wang

Bioinformatics· March 2024

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Towards Strain-Level Complexity: Sequencing Depth Required for Comprehensive Single-Nucleotide Polymorphism Analysis of the Human Gut Microbiome.
Pu Liu, Shuofeng Hu, Zhen He, Chao Feng, Guohua Dong, Runyan Liu

Front Microbiol· May 2022

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Comprehensive Strain-Level Analysis of the Gut Microbe Faecalibacterium prausnitzii in Patients with Liver Cirrhosis.
Yaowen Chen, Pu Liu, Runyan Liu, Shuofeng Hu, Zhen He

mSystems· August 2021

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