Publications by authors named "Ruth Swanson-Wagner"

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Exploring genetic variation in the tomato (Solanum section Lycopersicon) clade by whole-genome sequencing.

Plant J· October 2014

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Epigenetic and genetic influences on DNA methylation variation in maize populations.
Steven R Eichten, Roman Briskine, Jawon Song, Qing Li, Ruth Swanson-Wagner

Plant Cell· August 2013

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Changes in genome content generated via segregation of non-allelic homologs.
Sanzhen Liu, Kai Ying, Cheng-Ting Yeh, Jinliang Yang, Ruth Swanson-Wagner

Plant J· November 2012

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Reshaping of the maize transcriptome by domestication.
Ruth Swanson-Wagner, Roman Briskine, Robert Schaefer, Matthew B Hufford, Jeffrey Ross-Ibarra

Proc Natl Acad Sci U S A· July 2012

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Comparative population genomics of maize domestication and improvement.
Matthew B Hufford, Xun Xu, Joost van Heerwaarden, Tanja Pyhäjärvi, Jer-Ming Chia, Ruth A Swanson-Wagner

Nat Genet· June 2012

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Parent-of-origin effects on gene expression and DNA methylation in the maize endosperm.
Amanda J Waters, Irina Makarevitch, Steve R Eichten, Ruth A Swanson-Wagner, Cheng-Ting Yeh

Plant Cell· December 2011

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Heritable epigenetic variation among maize inbreds.
Steve R Eichten, Ruth A Swanson-Wagner, James C Schnable, Amanda J Waters, Peter J Hermanson

PLoS Genet· November 2011

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Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor.
Ruth A Swanson-Wagner, Steven R Eichten, Sunita Kumari, Peter Tiffin, Joshua C Stein

Genome Res· December 2010

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Repeat subtraction-mediated sequence capture from a complex genome.
Yan Fu, Nathan M Springer, Daniel J Gerhardt, Kai Ying, Cheng-Ting Yeh, Ruth Swanson-Wagner

Plant J· June 2010

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Paternal dominance of trans-eQTL influences gene expression patterns in maize hybrids.
Ruth A Swanson-Wagner, Rhonda DeCook, Yi Jia, Tim Bancroft, Tieming Ji

Science· November 2009

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All possible modes of gene action are observed in a global comparison of gene expression in a maize F1 hybrid and its inbred parents.
Ruth A Swanson-Wagner, Yi Jia, Rhonda DeCook, Lisa A Borsuk, Dan Nettleton

Proc Natl Acad Sci U S A· May 2006

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