Publications by authors named "Ryan Mills"

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Basic Science and Pathogenesis.
Weichen Zhou, Camille Mumm, Yanming Gan, Jessica A Switzenberg, Jinhao Wang, Ryan E Mills

Alzheimers Dement· December 2025

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Genomic Signatures of Poor Prognosis in Merkel Cell Carcinoma: A Single-Institution Prospective Study.
Joshua D Smith, Apurva D Bhangale, Wenjin Gu, Collin Brummel, Elizabeth Gensterblum-Miller, Ryan E Mills

Mol Cancer Res· November 2025

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A personalized multi-platform assessment of somatic mosaicism in the human frontal cortex.
Weichen Zhou, Camille Mumm, Yanming Gan, Jessica A Switzenberg, Jinhao Wang, Ryan E Mills

bioRxiv· October 2025

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Multi-platform framework for mapping somatic retrotransposition in human tissues.
Seunghyun Wang, Mingyun Bae, Jinhao Wang, Boxun Zhao, Khue Nguyen, Ryan E Mills

bioRxiv· October 2025

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Author Correction: Complex genetic variation in nearly complete human genomes.
Glennis A Logsdon, Peter Ebert, Peter A Audano, Mark Loftus, David Porubsky, Ryan E Mills

Nature· September 2025

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Complex genetic variation in nearly complete human genomes.
Glennis A Logsdon, Peter Ebert, Peter A Audano, Mark Loftus, David Porubsky, Ryan E Mills

Nature· August 2025

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The Somatic Mosaicism across Human Tissues Network.
Tim H H Coorens, Ji Won Oh, Yujin Angelina Choi, Nam Seop Lim, Boxun Zhao, Ryan E Mills

Nature· July 2025

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Long Noncoding RNAs Expressed in Mouse Pituitary Development and Mature Hormone-Producing Cells.
Michelle Lynn Brinkmeier, Akima Semone George, Leonard Yan Ming Cheung, Ryan Edward Mills, Philippa Melamed

Endocrinology· October 2024

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Complex genetic variation in nearly complete human genomes.
Glennis A Logsdon, Peter Ebert, Peter A Audano, Mark Loftus, David Porubsky, Ryan E Mills

bioRxiv· September 2024

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Somatic nuclear mitochondrial DNA insertions are prevalent in the human brain and accumulate over time in fibroblasts.
Weichen Zhou, Kalpita R Karan, Wenjin Gu, Hans-Ulrich Klein, Gabriel Sturm, Ryan E Mills

PLoS Biol· August 2024

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Mapping recurrent mosaic copy number variation in human neurons.
Chen Sun, Kunal Kathuria, Sarah B Emery, ByungJun Kim, Ian E Burbulis, Ryan E Mills

Nat Commun· May 2024

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Genomic data resources of the Brain Somatic Mosaicism Network for neuropsychiatric diseases.
McKinzie A Garrison, Yeongjun Jang, Taejeong Bae, Adriana Cherskov, Sarah B Emery, Ryan E Mills

Sci Data· November 2023

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Candida albicans selection for human commensalism results in substantial within-host diversity without decreasing fitness for invasive disease.
Faith M Anderson, Noelle D Visser, Kevin R Amses, Andrea Hodgins-Davis, Alexandra M Weber, Ryan E Mills

PLoS Biol· May 2023

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Somatic nuclear mitochondrial DNA insertions are prevalent in the human brain and accumulate over time in fibroblasts.
Weichen Zhou, Kalpita R Karan, Wenjin Gu, Hans-Ulrich Klein, Gabriel Sturm, Ryan E Mills

bioRxiv· April 2023

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Mapping the Complex Genetic Landscape of Human Neurons.
Chen Sun, Kunal Kathuria, Sarah B Emery, ByungJun Kim, Ian E Burbulis, Ryan E Mills

bioRxiv· March 2023

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Analysis of Human Papilloma Virus Content and Integration in Mucoepidermoid Carcinoma.
Wenjin Gu, Apurva Bhangale, Molly E Heft Neal, Josh D Smith, Collin Brummel, Ryan E Mills

Viruses· October 2022

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Early HPV ctDNA Kinetics and Imaging Biomarkers Predict Therapeutic Response in p16+ Oropharyngeal Squamous Cell Carcinoma.
Yue Cao, Catherine T Haring, Collin Brummel, Chandan Bhambhani, Madhava Aryal, Ryan E Mills

Clin Cancer Res· January 2022

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SearcHPV: A novel approach to identify and assemble human papillomavirus-host genomic integration events in cancer.
Lisa M Pinatti, Wenjin Gu, Yifan Wang, Ahmed Elhossiny, Apurva D Bhangale, Ryan E Mills

Cancer· October 2021

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SquiggleNet: real-time, direct classification of nanopore signals.
Yuwei Bao, Jack Wadden, John R Erb-Downward, Piyush Ranjan, Weichen Zhou, Ryan E Mills

Genome Biol· October 2021

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Cas9 targeted enrichment of mobile elements using nanopore sequencing.
Torrin L McDonald, Weichen Zhou, Christopher P Castro, Camille Mumm, Jessica A Switzenberg, Ryan E Mills

Nat Commun· June 2021

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Expectations and blind spots for structural variation detection from long-read assemblies and short-read genome sequencing technologies.
Xuefang Zhao, Ryan L Collins, Wan-Ping Lee, Alexandra M Weber, Yukyung Jun, Ryan E Mills

Am J Hum Genet· May 2021

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Haplotype-resolved diverse human genomes and integrated analysis of structural variation.
Peter Ebert, Peter A Audano, Qihui Zhu, Bernardo Rodriguez-Martin, David Porubsky, Ryan E Mills

Science· April 2021

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Comprehensive identification of somatic nucleotide variants in human brain tissue.
Yifan Wang, Taejeong Bae, Jeremy Thorpe, Maxwell A Sherman, Attila G Jones, Ryan E Mills

Genome Biol· March 2021

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Genome diversity in Ukraine.
Taras K Oleksyk, Walter W Wolfsberger, Alexandra M Weber, Khrystyna Shchubelka, Olga T Oleksyk, Ryan E Mills

Gigascience· January 2021

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Characterization of nuclear mitochondrial insertions in the whole genomes of primates.
Gargi Dayama, Weichen Zhou, Javier Prado-Martinez, Tomas Marques-Bonet, Ryan E Mills

NAR Genom Bioinform· December 2020

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