Publications by authors named "Sahoko Tomida"

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Author Correction: Crystal structure of heliorhodopsin.
Wataru Shihoya, Keiichi Inoue, Manish Singh, Masae Konno, Shoko Hososhima, Sahoko Tomida

Nature· October 2025

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Protonation of Asp116 and distortion of the all-trans retinal chromophore in Krokinobacter eikastus rhodopsin 2 causes a redshift in absorption maximum upon dehydration.
Sahoko Tomida, Akimori Wada, Yuji Furutani

Photochem Photobiol Sci· November 2023

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Covalent Bond between the Lys-255 Residue and the Main Chain Is Responsible for Stable Retinal Chromophore Binding and Sodium-Pumping Activity of Rhodopsin 2.
Shoha Ochiai, Yuki Ichikawa, Sahoko Tomida, Yuji Furutani

Biochemistry· June 2023

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Inverse Hydrogen-Bonding Change Between the Protonated Retinal Schiff Base and Water Molecules upon Photoisomerization in Heliorhodopsin 48C12.
Sahoko Tomida, Shinya Kitagawa, Hideki Kandori, Yuji Furutani

J Phys Chem B· August 2021

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Infrared spectroscopic analysis on structural changes around the protonated Schiff base upon retinal isomerization in light-driven sodium pump KR2.
Sahoko Tomida, Shota Ito, Tomoya Mato, Yuji Furutani, Keiichi Inoue

Biochim Biophys Acta Bioenerg· July 2020

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Mechanism of Inward Proton Transport in an Antarctic Microbial Rhodopsin.
Andrew Harris, Michalis Lazaratos, Malte Siemers, Ethan Watt, Anh Hoang, Sahoko Tomida

J Phys Chem B· June 2020

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Schizorhodopsins: A family of rhodopsins from Asgard archaea that function as light-driven inward H pumps.
Keiichi Inoue, Satoshi P Tsunoda, Manish Singh, Sahoko Tomida, Shoko Hososhima

Sci Adv· April 2020

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Crystal structure of heliorhodopsin.
Wataru Shihoya, Keiichi Inoue, Manish Singh, Masae Konno, Shoko Hososhima, Sahoko Tomida

Nature· October 2019

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Red-shifting mutation of light-driven sodium-pump rhodopsin.
Keiichi Inoue, María Del Carmen Marín, Sahoko Tomida, Ryoko Nakamura, Yuta Nakajima

Nat Commun· April 2019

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Hydrogen-bonding network at the cytoplasmic region of a light-driven sodium pump rhodopsin KR2.
Sahoko Tomida, Shota Ito, Keiichi Inoue, Hideki Kandori

Biochim Biophys Acta Bioenerg· September 2018

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A distinct abundant group of microbial rhodopsins discovered using functional metagenomics.
Alina Pushkarev, Keiichi Inoue, Shirley Larom, José Flores-Uribe, Manish Singh, Sahoko Tomida

Nature· June 2018

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Long-distance perturbation on Schiff base-counterion interactions by His30 and the extracellular Na-binding site in Krokinobacter rhodopsin 2.
Arisu Shigeta, Shota Ito, Rina Kaneko, Sahoko Tomida, Keiichi Inoue

Phys Chem Chem Phys· March 2018

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