Publications by authors named "Sam Reffsin"

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Single-cell susceptibility to viral infection is driven by variable cell states.
Sam Reffsin, Jesse Miller, Kasirajan Ayyanathan, Margaret C Dunagin, Yael Heyman

Cell· November 2025

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Piscis: A loss estimator of the F1 score enables accurate spot detection in fluorescence microscopy images via deep learning.
Zijian Niu, Aoife O'Farrell, Jingxin Li, Sam Reffsin, Naveen Jain

Cell Syst· November 2025

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Piscis: a novel loss estimator of the F1 score enables accurate spot detection in fluorescence microscopy images via deep learning.
Zijian Niu, Aoife O'Farrell, Jingxin Li, Sam Reffsin, Naveen Jain

bioRxiv· January 2025

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Retrospective identification of cell-intrinsic factors that mark pluripotency potential in rare somatic cells.
Naveen Jain, Yogesh Goyal, Margaret C Dunagin, Christopher J Cote, Ian A Mellis, Sam Reffsin

Cell Syst· February 2024

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Single cell susceptibility to SARS-CoV-2 infection is driven by variable cell states.
Sam Reffsin, Jesse Miller, Kasirajan Ayyanathan, Margaret C Dunagin, Naveen Jain

bioRxiv· July 2023

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Retrospective identification of intrinsic factors that mark pluripotency potential in rare somatic cells.
Naveen Jain, Yogesh Goyal, Margaret C Dunagin, Christopher J Cote, Ian A Mellis, Sam Reffsin

bioRxiv· February 2023

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Multiplexed detection of SARS-CoV-2 genomic and subgenomic RNA using hybridization.
Kofi K Acheampong, Dylan L Schaff, Benjamin L Emert, Jonathan Lake, Sam Reffsin

bioRxiv· August 2021

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Subcellular Detection of SARS-CoV-2 RNA in Human Tissue Reveals Distinct Localization in Alveolar Type 2 Pneumocytes and Alveolar Macrophages.
Kofi K Acheampong, Dylan L Schaff, Benjamin L Emert, Jonathan Lake, Sam Reffsin

mBio· February 2021

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