Publications by authors named "Samuel Kaski"

Claim this Profile
T
Towards modeling evolving longitudinal health trajectories with a transformer-based deep learning model.
Hans Moen, Vishnu Raj, Andrius Vabalas, Markus Perola, Samuel Kaski

Ann Epidemiol· November 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
V
VitroBert: modeling DILI by pretraining BERT on in vitro data.
Muhammad Arslan Masood, Anamya Ajjolli Nagaraja, Katia Belaid, Natalie Mesens, Hugo Ceulemans, Samuel Kaski

J Cheminform· August 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Misspecification-robust likelihood-free inference in high dimensions.
Owen Thomas, Raquel Sá-Leão, Hermínia de Lencastre, Samuel Kaski, Jukka Corander

Comput Stat· May 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Molecular property prediction using pretrained-BERT and Bayesian active learning: a data-efficient approach to drug design.
Muhammad Arslan Masood, Samuel Kaski, Tianyu Cui

J Cheminform· April 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
E
E-GuARD: expert-guided augmentation for the robust detection of compounds interfering with biological assays.
Vincenzo Palmacci, Yasmine Nahal, Matthias Welsch, Ola Engkvist, Samuel Kaski

J Cheminform· April 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
H
Human-in-the-loop active learning for goal-oriented molecule generation.
Yasmine Nahal, Janosch Menke, Julien Martinelli, Markus Heinonen, Mikhail Kabeshov, Samuel Kaski

J Cheminform· December 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Metis: a python-based user interface to collect expert feedback for generative chemistry models.
Janosch Menke, Yasmine Nahal, Esben Jannik Bjerrum, Mikhail Kabeshov, Samuel Kaski

J Cheminform· August 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
Collaborative learning from distributed data with differentially private synthetic data.
Lukas Prediger, Joonas Jälkö, Antti Honkela, Samuel Kaski

BMC Med Inform Decis Mak· June 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
B
Bayesian reduced rank regression models generalizable neural fingerprints that differentiate between individuals in magnetoencephalography data.
Joonas Haakana, Susanne Merz, Samuel Kaski, Hanna Renvall, Riitta Salmelin

Eur J Neurosci· May 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Intelligent digital tools for screening of brain connectivity and dementia risk estimation in people affected by mild cognitive impairment: the AI-Mind clinical study protocol.
Ira H Haraldsen, Christoffer Hatlestad-Hall, Camillo Marra, Hanna Renvall, Fernando Maestú, Samuel Kaski

Front Neurorobot· January 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
H
HAPNEST: efficient, large-scale generation and evaluation of synthetic datasets for genotypes and phenotypes.
Sophie Wharrie, Zhiyu Yang, Vishnu Raj, Remo Monti, Rahul Gupta, Samuel Kaski

Bioinformatics· September 2023

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
Chemistry-Based Modeling on Phenotype-Based Drug-Induced Liver Injury Annotation: From Public to Proprietary Data.
Mohammad Moein, Markus Heinonen, Natalie Mesens, Ronnie Chamanza, Chidozie Amuzie, Samuel Kaski

Chem Res Toxicol· August 2023

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Modeling needs user modeling.
Mustafa Mert Çelikok, Pierre-Alexandre Murena, Samuel Kaski

Front Artif Intell· April 2023

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Identification of multiplicatively acting modulatory mutational signatures in cancer.
Dovydas Kičiatovas, Qingli Guo, Miika Kailas, Henri Pesonen, Jukka Corander, Samuel Kaski

BMC Bioinformatics· December 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
H
Human-in-the-loop assisted de novo molecular design.
Iiris Sundin, Alexey Voronov, Haoping Xiao, Kostas Papadopoulos, Esben Jannik Bjerrum, Samuel Kaski

J Cheminform· December 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
G
Gene-gene interaction detection with deep learning.
Tianyu Cui, Khaoula El Mekkaoui, Jaakko Reinvall, Aki S Havulinna, Pekka Marttinen, Samuel Kaski

Commun Biol· November 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
The relationship between electrophysiological and hemodynamic measures of neural activity varies across picture naming tasks: A multimodal magnetoencephalography-functional magnetic resonance imaging study.
Tommi Mononen, Jan Kujala, Mia Liljeström, Eemeli Leppäaho, Samuel Kaski

Front Neurosci· November 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
D
DIVERSE: Bayesian Data IntegratiVE Learning for Precise Drug ResponSE Prediction.
Betul Guvenc Paltun, Samuel Kaski, Hiroshi Mamitsuka

IEEE/ACM Trans Comput Biol Bioinform· August 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
M
Machine learning approaches for drug combination therapies.
Betül Güvenç Paltun, Samuel Kaski, Hiroshi Mamitsuka

Brief Bioinform· November 2021

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
P
Privacy-preserving data sharing via probabilistic modeling.
Joonas Jälkö, Eemil Lagerspetz, Jari Haukka, Sasu Tarkoma, Antti Honkela, Samuel Kaski

Patterns (N Y)· July 2021

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Improving drug response prediction by integrating multiple data sources: matrix factorization, kernel and network-based approaches.
Betül Güvenç Paltun, Hiroshi Mamitsuka, Samuel Kaski

Brief Bioinform· January 2021

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
Substrate specificity of 2-deoxy-D-ribose 5-phosphate aldolase (DERA) assessed by different protein engineering and machine learning methods.
Sanni Voutilainen, Markus Heinonen, Martina Andberg, Emmi Jokinen, Hannu Maaheimo, Samuel Kaski

Appl Microbiol Biotechnol· December 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Integrating neurophysiologic relevance feedback in intent modeling for information retrieval.
Giulio Jacucci, Oswald Barral, Pedram Daee, Markus Wenzel, Baris Serim, Samuel Kaski

J Assoc Inf Sci Technol· September 2019

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
B
Block HSIC Lasso: model-free biomarker detection for ultra-high dimensional data.
Héctor Climente-González, Chloé-Agathe Azencott, Samuel Kaski, Makoto Yamada

Bioinformatics· July 2019

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
B
Bayesian metabolic flux analysis reveals intracellular flux couplings.
Markus Heinonen, Maria Osmala, Henrik Mannerström, Janne Wallenius, Samuel Kaski

Bioinformatics· July 2019

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis