Publications by authors named "Samuel Pastva"

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An open problem: Why are motif-avoidant attractors so rare in asynchronous Boolean networks?
Samuel Pastva, Kyu Hyong Park, Ondřej Huvar, Jordan C Rozum, Réka Albert

J Math Biol· June 2025

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Mapping the attractor landscape of Boolean networks with biobalm.
Van-Giang Trinh, Kyu Hyong Park, Samuel Pastva, Jordan C Rozum

Bioinformatics· May 2025

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Trap spaces of multi-valued networks: definition, computation, and applications.
Van-Giang Trinh, Belaid Benhamou, Thomas Henzinger, Samuel Pastva

Bioinformatics· June 2023

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Boolean network sketches: a unifying framework for logical model inference.
Nikola Beneš, Luboš Brim, Ondřej Huvar, Samuel Pastva, David Šafránek

Bioinformatics· April 2023

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Rule-based modelling of biological systems using regulated rewriting.
Matej Troják, David Šafránek, Samuel Pastva, Luboš Brim

Biosystems· March 2023

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Temporary and permanent control of partially specified Boolean networks.
Luboš Brim, Samuel Pastva, David Šafránek, Eva Šmijáková

Biosystems· January 2023

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AEON.py: Python library for attractor analysis in asynchronous Boolean networks.
Nikola Beneš, Luboš Brim, Ondřej Huvar, Samuel Pastva, David Šafránek

Bioinformatics· October 2022

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Exploring attractor bifurcations in Boolean networks.
Nikola Beneš, Luboš Brim, Jakub Kadlecaj, Samuel Pastva, David Šafránek

BMC Bioinformatics· May 2022

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