Publications by authors named "Scott Boyer"

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Investigating the neuronal role of the proteasomal ATPase subunit gene PSMC5 in neurodevelopmental proteasomopathies.
Sébastien Küry, Janelle E Stanton, Geeske M van Woerden, Amélie Bosc-Rosati, Tzung-Chien Hsieh, Marie Pier Scott-Boyer

Nat Commun· November 2025

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A systematic benchmark of integrative strategies for microbiome-metabolome data.
Loïc Mangnier, Antoine Bodein, Margaux Mariaz, Alban Mathieu, Marie-Pier Scott-Boyer

Commun Biol· July 2025

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Identification of MEF2A, MEF2C, and MEF2D interactomes in basal and Fsk-stimulated mouse MA-10 Leydig cells.
Karine de Mattos, Marie-Pier Scott-Boyer, Arnaud Droit, Robert S Viger, Jacques J Tremblay

Andrology· April 2025

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Improving drug repositioning with negative data labeling using large language models.
Milan Picard, Mickael Leclercq, Antoine Bodein, Marie Pier Scott-Boyer, Olivier Perin

J Cheminform· February 2025

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Refined ADME Profiles for ATC Drug Classes.
Luca Menestrina, Raquel Parrondo-Pizarro, Ismael Gómez, Ricard Garcia-Serna, Scott Boyer

Pharmaceutics· February 2025

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Shear stress effects on epididymal epithelial cell via primary cilia mechanosensory signaling.
Sepideh Fakhari, Gabriel Campolina-Silva, Farnaz Asayesh, Laura Girardet, Marie-Pier Scott-Boyer

J Cell Physiol· January 2025

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Target repositioning using multi-layer networks and machine learning: The case of prostate cancer.
Milan Picard, Marie-Pier Scott-Boyer, Antoine Bodein, Mickaël Leclercq, Julien Prunier

Comput Struct Biotechnol J· December 2024

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An age-progressive platelet differentiation path from hematopoietic stem cells causes exacerbated thrombosis.
Donna M Poscablo, Atesh K Worthington, Stephanie Smith-Berdan, Marcel G E Rommel, Bryce A Manso, Scott W Boyer

Cell· June 2024

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A Machine Learning Approach to Identify Key Residues Involved in Protein-Protein Interactions Exemplified with SARS-CoV-2 Variants.
Léopold Quitté, Mickael Leclercq, Julien Prunier, Marie-Pier Scott-Boyer, Gautier Moroy

Int J Mol Sci· June 2024

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SOS genes are rapidly induced while translesion synthesis polymerase activity is temporally regulated.
Olaug Elisabeth Torheim Bergum, Amanda Holstad Singleton, Lisa Marie Røst, Antoine Bodein, Marie-Pier Scott-Boyer

Front Microbiol· March 2024

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Unveiling the crucial neuronal role of the proteasomal ATPase subunit gene in neurodevelopmental proteasomopathies.
Sébastien Küry, Janelle E Stanton, Geeske van Woerden, Tzung-Chien Hsieh, Cory Rosenfelt, Marie Pier Scott-Boyer

medRxiv· January 2024

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Use of Elasticsearch-based business intelligence tools for integration and visualization of biological data.
Marie-Pier Scott-Boyer, Pascal Dufour, François Belleau, Regis Ongaro-Carcy, Clément Plessis

Brief Bioinform· September 2023

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Transgenerational impact of grand-paternal lifetime exposures to both folic acid deficiency and supplementation on genome-wide DNA methylation in male germ cells.
Donovan Chan, Lundi Ly, Edgar Martínez Duncker Rebolledo, Josée Martel, Mylène Landry, Marie-Pier Scott-Boyer

Andrology· July 2023

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PSMC3 proteasome subunit variants are associated with neurodevelopmental delay and type I interferon production.
Frédéric Ebstein, Sébastien Küry, Victoria Most, Cory Rosenfelt, Marie-Pier Scott-Boyer

Sci Transl Med· May 2023

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Decreased levels of discomfort in repeatedly handled mice during experimental procedures, assessed by facial expressions.
Julia Swan, Scott Boyer, Karolina Westlund, Camilla Bengtsson, Gunnar Nordahl

Front Behav Neurosci· February 2023

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Overview of methods for characterization and visualization of a protein-protein interaction network in a multi-omics integration context.
Vivian Robin, Antoine Bodein, Marie-Pier Scott-Boyer, Mickaël Leclercq, Olivier Périn

Front Mol Biosci· September 2022

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New Developments and Possibilities in Reanalysis and Reinterpretation of Whole Exome Sequencing Datasets for Unsolved Rare Diseases Using Machine Learning Approaches.
Samarth Thonta Setty, Marie-Pier Scott-Boyer, Tania Cuppens, Arnaud Droit

Int J Mol Sci· June 2022

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Interpretation of network-based integration from multi-omics longitudinal data.
Antoine Bodein, Marie-Pier Scott-Boyer, Olivier Perin, Kim-Anh Lê Cao, Arnaud Droit

Nucleic Acids Res· March 2022

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Sperm Heterogeneity Accounts for Sperm DNA Methylation Variations Observed in the Caput Epididymis, Independently From DNMT/TET Activities.
Hong Chen, Marie-Pier Scott-Boyer, Arnaud Droit, Claude Robert, Clémence Belleannée

Front Cell Dev Biol· March 2022

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New transgenic mouse models enabling pan-hematopoietic or selective hematopoietic stem cell depletion in vivo.
Alessandra Rodriguez Y Baena, Smrithi Rajendiran, Bryce A Manso, Jana Krietsch, Scott W Boyer

Sci Rep· February 2022

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timeOmics: an R package for longitudinal multi-omics data integration.
Antoine Bodein, Marie-Pier Scott-Boyer, Olivier Perin, Kim-Anh Lê Cao, Arnaud Droit

Bioinformatics· January 2022

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Proteomic Analysis of Maternal Urine for the Early Detection of Preeclampsia and Fetal Growth Restriction.
Emmanuel Bujold, Alexandre Fillion, Florence Roux-Dalvai, Marie Pier Scott-Boyer, Yves Giguère

J Clin Med· October 2021

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Integration strategies of multi-omics data for machine learning analysis.
Milan Picard, Marie-Pier Scott-Boyer, Antoine Bodein, Olivier Périn, Arnaud Droit

Comput Struct Biotechnol J· June 2021

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GWENA: gene co-expression networks analysis and extended modules characterization in a single Bioconductor package.
Gwenaëlle G Lemoine, Marie-Pier Scott-Boyer, Bathilde Ambroise, Olivier Périn, Arnaud Droit

BMC Bioinformatics· May 2021

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Early-Life Exposure to Environmental Contaminants Perturbs the Sperm Epigenome and Induces Negative Pregnancy Outcomes for Three Generations via the Paternal Lineage.
Clotilde Maurice, Mathieu Dalvai, Romain Lambrot, Astrid Deschênes, Marie-Pier Scott-Boyer

Epigenomes· May 2021

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