Publications by authors named "Scott Ochsner"

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Lung NR3C1 and CXCR6 T cells distinguish immunopathogenesis of human emphysema.
Yun Zhang, Maor Sauler, David B Corry, Scott A Ochsner, Sarah Perusich

Commun Biol· September 2025

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Macropinocytosis inhibition attenuates pro-fibrotic responses in lung fibroblasts and pulmonary fibrosis.
Ivan O Rosas, Aaron K McDowell-Sanchez, Santiago Sanchez, Juan D Cala-Garcia, Alan R Waich Cohen, Scott A Ochsner

bioRxiv· July 2025

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Single cell transcriptomics in a treatment-segregated cohort exposes a STAT3-regulated therapeutic gap in idiopathic pulmonary fibrosis.
Neil J McKenna, Scott A Ochsner, Alan Waich, Juan Cala-Garcia, Maria E Ruiz Echartrea

bioRxiv· June 2025

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Let-7 restrains an epigenetic circuit in AT2 cells to prevent fibrogenic intermediates in pulmonary fibrosis.
Matthew J Seasock, Md Shafiquzzaman, Maria E Ruiz-Echartea, Rupa S Kanchi, Brandon T Tran, Scott A Ochsner

Nat Commun· May 2025

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Single-nucleus transcriptional profiling of the placenta reveals the syncytiotrophoblast stress response to COVID-19.
Rachel A Keuls, Scott A Ochsner, Mary B O'Neill, Diana R O'Day, Akihiko Miyauchi

Am J Obstet Gynecol· April 2025

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Islet single-cell transcriptomic profiling during obesity-induced beta cell expansion in female mice.
Peter M Masschelin, Scott A Ochsner, Sean M Hartig, Neil J McKenna, Aaron R Cox

iScience· March 2025

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restrains an oncogenic circuit in AT2 cells to prevent fibrogenic cell intermediates in pulmonary fibrosis.
Matthew J Seasock, Md Shafiquzzaman, Maria E Ruiz-Echartea, Rupa S Kanchi, Brandon T Tran, Scott A Ochsner

bioRxiv· February 2025

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Skewed adaptive immune responses are involved in alpha-1 antitrypsin deficiency emphysema.
Joselyn Rojas-Quintero, Scott A Ochsner, Hyun-Sung Lee, Christine Cong, Alan Waich Cohen

Eur Respir J· January 2025

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PIK-III exerts anti-fibrotic effects in activated fibroblasts by regulating p38 activation.
Santiago Sanchez, Aaron K McDowell-Sanchez, Sharaz B Al-Meerani, Juan D Cala-Garcia, Alan R Waich Cohen, Scott A Ochsner

PLoS One· September 2024

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Histone proteoform analysis reveals epigenetic changes in adult mouse brown adipose tissue in response to cold stress.
Bethany C Taylor, Loic H Steinthal, Michelle Dias, Hari Krishna Yalamanchili, Scott A Ochsner

Epigenetics Chromatin· April 2024

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Spatial Transcriptomics Resolve an Emphysema-Specific Lymphoid Follicle B Cell Signature in Chronic Obstructive Pulmonary Disease.
Joselyn Rojas-Quintero, Scott A Ochsner, Felicia New, Prajan Divakar, Chen Xi Yang

Am J Respir Crit Care Med· January 2024

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Histone proteoform analysis reveals epigenetic changes in adult mouse brown adipose tissue in response to cold stress.
Bethany C Taylor, Loic H Steinthal, Michelle Dias, Hari K Yalamanchili, Scott A Ochsner

bioRxiv· January 2024

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IL17A Blockade with Ixekizumab Suppresses MuvB Signaling in Clinical Psoriasis.
Scott A Ochsner, Mesias Pedroza, Rudolf T Pillich, Venkatesh Krishnan, Bruce W Konicek

J Invest Dermatol· September 2023

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SHP2 promotes sarcoidosis severity by inhibiting SKP2-targeted ubiquitination of TBET in CD8 T cells.
Sherly I Celada, Clarice X Lim, Alexandre F Carisey, Scott A Ochsner, Carlos F Arce Deza

Sci Transl Med· September 2023

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Vitamin B2 enables regulation of fasting glucose availability.
Peter M Masschelin, Pradip Saha, Scott A Ochsner, Aaron R Cox, Kang Ho Kim

Elife· July 2023

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Transcriptional regulatory networks of circulating immune cells in type 1 diabetes: A community knowledgebase.
Scott A Ochsner, Rudolf T Pillich, Deepali Rawool, Jeffrey S Grethe, Neil J McKenna

iScience· July 2022

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Adipocyte-Specific Ablation of PU.1 Promotes Energy Expenditure and Ameliorates Metabolic Syndrome in Aging Mice.
Ke Yun Chen, Alejandra De Angulo, Xin Guo, Aditya More, Scott A Ochsner

Front Aging· February 2022

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Conserved immunomodulatory transcriptional networks underlie antipsychotic-induced weight gain.
Rizaldy C Zapata, Besma S Chaudry, Mariela Lopez Valencia, Dinghong Zhang, Scott A Ochsner

Transl Psychiatry· July 2021

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A human liver chimeric mouse model for non-alcoholic fatty liver disease.
Beatrice Bissig-Choisat, Michele Alves-Bezerra, Barry Zorman, Scott A Ochsner, Mercedes Barzi

JHEP Rep· June 2021

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Consensus transcriptional regulatory networks of coronavirus-infected human cells.
Scott A Ochsner, Rudolf T Pillich, Neil J McKenna

Sci Data· September 2020

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Consensus transcriptional regulatory networks of coronavirus-infected human cells.
Scott A Ochsner, Rudolf T Pillich, Neil J McKenna

bioRxiv· July 2020

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No Dataset Left Behind: Mechanistic Insights into Thyroid Receptor Signaling Through Transcriptomic Consensome Meta-Analysis.
Scott A Ochsner, Neil J McKenna

Thyroid· April 2020

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The Signaling Pathways Project, an integrated 'omics knowledgebase for mammalian cellular signaling pathways.
Scott A Ochsner, David Abraham, Kirt Martin, Wei Ding, Apollo McOwiti

Sci Data· October 2019

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Discovering relationships between nuclear receptor signaling pathways, genes, and tissues in Transcriptomine.
Lauren B Becnel, Scott A Ochsner, Yolanda F Darlington, Apollo McOwiti, Wasula H Kankanamge

Sci Signal· April 2017

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A Transcriptomic Signature of Mouse Liver Progenitor Cells.
Adam M Passman, Jasmine Low, Roslyn London, Janina E E Tirnitz-Parker, Atsushi Miyajima, Scott Ochsner

Stem Cells Int· October 2016

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