Publications by authors named "Sean D Colloms"

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Quantifying complexity in DNA structures with high resolution Atomic Force Microscopy.
Elizabeth P Holmes, Max C Gamill, James I Provan, Laura Wiggins, Renáta Rusková, Sean D Colloms

Nat Commun· July 2025

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High fidelity one-pot DNA assembly using orthogonal serine integrases.
Jumai Abioye, Makeba Lawson-Williams, Alicia Lecanda, Brecken Calhoon, Arlene L McQue, Sean D Colloms

Biotechnol J· March 2023

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Drift dynamics in microbial communities and the effective community size.
William T Sloan, Chioma F Nnaji, Mary Lunn, Thomas P Curtis, Sean D Colloms

Environ Microbiol· May 2021

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A novel decatenation assay for DNA topoisomerases using a singly-linked catenated substrate.
Nidda F Waraich, Shruti Jain, Sean D Colloms, William Marshall Stark, Nicolas P Burton

Biotechniques· November 2020

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A single-input binary counting module based on serine integrase site-specific recombination.
Jia Zhao, Alexandra Pokhilko, Oliver Ebenhöh, Susan J Rosser, Sean D Colloms

Nucleic Acids Res· May 2019

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A Mini-ISY100 Transposon Delivery System Effective in γ Proteobacteria.
Emanuele Conte, Linda Mende, Ian Grainge, Sean D Colloms

Front Microbiol· February 2019

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Mathematical model of a serine integrase-controlled toggle switch with a single input.
Alexandra Pokhilko, Oliver Ebenhöh, W Marshall Stark, Sean D Colloms

J R Soc Interface· June 2018

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Multipart DNA Assembly Using Site-Specific Recombinases from the Large Serine Integrase Family.
Femi J Olorunniji, Christine Merrick, Susan J Rosser, Margaret C M Smith, W Marshall Stark, Sean D Colloms

Methods Mol Biol· April 2018

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Control of serine integrase recombination directionality by fusion with the directionality factor.
Femi J Olorunniji, Arlene L McPherson, Susan J Rosser, Margaret C M Smith, Sean D Colloms

Nucleic Acids Res· August 2017

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A simplified mathematical model of directional DNA site-specific recombination by serine integrases.
Alexandra Pokhilko, Jia Zhao, W Marshall Stark, Sean D Colloms, Oliver Ebenhöh

J R Soc Interface· January 2017

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The mechanism of ϕC31 integrase directionality: experimental analysis and computational modelling.
Alexandra Pokhilko, Jia Zhao, Oliver Ebenhöh, Margaret C M Smith, W Marshall Stark, Sean D Colloms

Nucleic Acids Res· September 2016

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Rapid metabolic pathway assembly and modification using serine integrase site-specific recombination.
Sean D Colloms, Christine A Merrick, Femi J Olorunniji, W Marshall Stark, Margaret C M Smith

Nucleic Acids Res· February 2014

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The topology of plasmid-monomerizing Xer site-specific recombination.
Sean D Colloms

Biochem Soc Trans· April 2013

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Gated rotation mechanism of site-specific recombination by ϕC31 integrase.
Femi J Olorunniji, Dorothy E Buck, Sean D Colloms, Andrew R McEwan, Margaret C M Smith

Proc Natl Acad Sci U S A· November 2012

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Precise targeted integration by a chimaeric transposase zinc-finger fusion protein.
Xiaofeng Feng, Amy L Bednarz, Sean D Colloms

Nucleic Acids Res· March 2010

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Molecular architecture of the Mos1 paired-end complex: the structural basis of DNA transposition in a eukaryote.
Julia M Richardson, Sean D Colloms, David J Finnegan, Malcolm D Walkinshaw

Cell· September 2009

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mwr Xer site-specific recombination is hypersensitive to DNA supercoiling.
Sonia Trigueros, Tung Tran, Nohemy Sorto, Jason Newmark, Sean D Colloms

Nucleic Acids Res· June 2009

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PepA and ArgR do not regulate Cre recombination at the bacteriophage P1 loxP site.
Alasdair I MacDonald, Yangjie Lu, Elizabeth A Kilbride, Aram Akopian, Sean D Colloms

Plasmid· March 2008

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In vitro transposition of ISY100, a bacterial insertion sequence belonging to the Tc1/mariner family.
Xiaofeng Feng, Sean D Colloms

Mol Microbiol· September 2007

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Communication between accessory factors and the Cre recombinase at hybrid psi-loxP sites.
Aram Akopian, Sarah Gourlay, Helen James, Sean D Colloms

J Mol Biol· April 2006

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Mutagenesis of PepA suggests a new model for the Xer/cer synaptic complex.
Martin Reijns, Yangjie Lu, Stephen Leach, Sean D Colloms

Mol Microbiol· August 2005

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Tangle analysis of Xer recombination reveals only three solutions, all consistent with a single three-dimensional topological pathway.
Mariel Vazquez, Sean D Colloms, De Witt Sumners

J Mol Biol· February 2005

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Control of Cre recombination by regulatory elements from Xer recombination systems.
Sarah C Gourlay, Sean D Colloms

Mol Microbiol· April 2004

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Accessory factors determine the order of strand exchange in Xer recombination at psi.
Migena Bregu, David J Sherratt, Sean D Colloms

EMBO J· July 2002

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