Publications by authors named "Sean R Davis"

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Software for the Integration of Multiomics Experiments in Bioconductor.
Marcel Ramos, Lucas Schiffer, Angela Re, Rimsha Azhar, Azfar Basunia, Sean R Davis

Cancer Res· November 2017

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Resources for Interpreting Variants in Precision Genomic Oncology Applications.
Hsinyi Tsang, KanakaDurga Addepalli, Sean R Davis

Front Oncol· September 2017

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Autoreactive T Cells and Chronic Fungal Infection Drive Esophageal Carcinogenesis.
Feng Zhu, Jami Willette-Brown, Na-Young Song, Dakshayani Lomada, Yongmei Song, Sean R Davis

Cell Host Microbe· April 2017

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On the Selective Packaging of Genomic RNA by HIV-1.
Mauricio Comas-Garcia, Sean R Davis, Alan Rein

Viruses· September 2016

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Point Mutations in Exon 1B of APC Reveal Gastric Adenocarcinoma and Proximal Polyposis of the Stomach as a Familial Adenomatous Polyposis Variant.
Jun Li, Susan L Woods, Sue Healey, Jonathan Beesley, Xiaoqing Chen, Sean R Davis

Am J Hum Genet· May 2016

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caOmicsV: an R package for visualizing multidimensional cancer genomic data.
Hongen Zhang, Paul S Meltzer, Sean R Davis

BMC Bioinformatics· March 2016

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NCI-60 whole exome sequencing and pharmacological CellMiner analyses.
William C Reinhold, Sudhir Varma, Fabricio Sousa, Margot Sunshine, Ogan D Abaan, Sean R Davis

PLoS One· December 2015

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Characterization of genomic alterations in radiation-associated breast cancer among childhood cancer survivors, using comparative genomic hybridization (CGH) arrays.
Xiaohong R Yang, J Keith Killian, Sue Hammond, Laura S Burke, Hunter Bennett, Sean R Davis

PLoS One· November 2015

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Super-enhancers delineate disease-associated regulatory nodes in T cells.
Golnaz Vahedi, Yuka Kanno, Yasuko Furumoto, Kan Jiang, Stephen C J Parker, Sean R Davis

Nature· April 2015

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High prevalence of MAP2K1 mutations in variant and IGHV4-34-expressing hairy-cell leukemias.
Joshua J Waterfall, Evgeny Arons, Robert L Walker, Marbin Pineda, Laura Roth, Sean R Davis

Nat Genet· January 2014

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A polymorphism in IRF4 affects human pigmentation through a tyrosinase-dependent MITF/TFAP2A pathway.
Christian Praetorius, Christine Grill, Simon N Stacey, Alexander M Metcalf, David U Gorkin, Sean R Davis

Cell· November 2013

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The exomes of the NCI-60 panel: a genomic resource for cancer biology and systems pharmacology.
Ogan D Abaan, Eric C Polley, Sean R Davis, Yuelin J Zhu, Sven Bilke

Cancer Res· July 2013

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Harnessing genomics to identify environmental determinants of heritable disease.
Carole Lyn Yauk, J Lucas Argueso, Scott S Auerbach, Philip Awadalla, Sean R Davis

Mutat Res· April 2013

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SRAdb: query and use public next-generation sequencing data from within R.
Yuelin Zhu, Robert M Stephens, Paul S Meltzer, Sean R Davis

BMC Bioinformatics· January 2013

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Genome-wide depletion of replication initiation events in highly transcribed regions.
Melvenia M Martin, Michael Ryan, RyangGuk Kim, Anna L Zakas, Haiqing Fu, Sean R Davis

Genome Res· November 2011

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Kinetic complexity of the global response to glucocorticoid receptor action.
Sam John, Thomas A Johnson, Myong-Hee Sung, Simon C Biddie, Saskia Trump, Sean R Davis

Endocrinology· April 2009

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TRAIL induces apoptosis in triple-negative breast cancer cells with a mesenchymal phenotype.
Monzur Rahman, Sean R Davis, Janet G Pumphrey, Jing Bao, Marion M Nau

Breast Cancer Res Treat· January 2009

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Interaction of the glucocorticoid receptor with the chromatin landscape.
Sam John, Peter J Sabo, Thomas A Johnson, Myong-Hee Sung, Simon C Biddie, Sean R Davis

Mol Cell· March 2008

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Modeling synovial sarcoma: timing is everything.
Sean R Davis, Paul S Meltzer

Cancer Cell· April 2007

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