Publications by authors named "Sean W Graham"

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Phylogenomic and morphological evidence supports the reinstatement of the bamboo genus Clavinodum from Oligostachyum (Poaceae: Bambusoideae).
Zheng-Yang Niu, Zhi-Xian Zhang, Zhuo-Yu Cai, Yi-Hua Tong, Si-Jin Zeng, Sean W Graham

Mol Phylogenet Evol· June 2025

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Phylogenomics and the rise of the angiosperms.
Alexandre R Zuntini, Tom Carruthers, Olivier Maurin, Paul C Bailey, Kevin Leempoel, Sean W Graham, Graham J King

Nature· May 2024

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Comprehensive phylogenomic time tree of bryophytes reveals deep relationships and uncovers gene incongruences in the last 500 million years of diversification.
Julia Bechteler, Gabriel Peñaloza-Bojacá, David Bell, J Gordon Burleigh, Stuart F McDaniel, Sean W Graham

Am J Bot· November 2023

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Balanophora genomes display massively convergent evolution with other extreme holoparasites and provide novel insights into parasite-host interactions.
Xiaoli Chen, Dongming Fang, Yuxing Xu, Kunyu Duan, Satoko Yoshida, Sean W Graham

Nat Plants· October 2023

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Plastid phylogenomics and molecular evolution of Thismiaceae (Dioscoreales).
Natalie Garrett, Juan Viruel, Nathaniel Klimpert, Marybel Soto Gomez, Vivienne K Y Lam, Sean W Graham

Am J Bot· April 2023

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Phylotranscriptomic Analyses of Mycoheterotrophic Monocots Show a Continuum of Convergent Evolutionary Changes in Expressed Nuclear Genes From Three Independent Nonphotosynthetic Lineages.
Prakash Raj Timilsena, Craig F Barrett, Alma Piñeyro-Nelson, Eric K Wafula, Saravanaraj Ayyampalayam, Sean W Graham

Genome Biol Evol· January 2023

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Mitochondrial genomic data are effective at placing mycoheterotrophic lineages in plant phylogeny.
Qianshi Lin, Thomas W A Braukmann, Marybel Soto Gomez, Juliana Lischka Sampaio Mayer, Fábio Pinheiro, Sean W Graham

New Phytol· December 2022

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Phylogenomics and plastome evolution of a Brazilian mycoheterotrophic orchid, Pogoniopsis schenckii.
Nathaniel J Klimpert, Juliana Lischka Sampaio Mayer, Deise Schroder Sarzi, Francisco Prosdocimi, Fábio Pinheiro, Sean W Graham

Am J Bot· December 2022

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Editorial: Monocot phylogenetics and trait evolution.
Margarita V Remizowa, Sean W Graham, Paula J Rudall

Front Plant Sci· November 2022

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Phylogenomic resolution of order- and family-level monocot relationships using 602 single-copy nuclear genes and 1375 BUSCO genes.
Prakash Raj Timilsena, Eric K Wafula, Craig F Barrett, Saravanaraj Ayyampalayam, Joel R McNeal, Sean W Graham

Front Plant Sci· November 2022

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Macroevolutionary dynamics in the transition of angiosperms to aquatic environments.
Andrea S Meseguer, Rubén Carrillo, Sean W Graham, Isabel Sanmartín

New Phytol· July 2022

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Incomplete lineage sorting and local extinction shaped the complex evolutionary history of the Paleogene relict conifer genus, Chamaecyparis (Cupressaceae).
Yi Wang, Markus Ruhsam, Richard Milne, Sean W Graham, Jialiang Li

Mol Phylogenet Evol· July 2022

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A new carnivorous plant lineage () with a unique sticky-inflorescence trap.
Qianshi Lin, Cécile Ané, Thomas J Givnish, Sean W Graham

Proc Natl Acad Sci U S A· August 2021

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Genomic Rearrangements and Sequence Evolution across Brown Algal Organelles.
Samuel Starko, Trevor T Bringloe, Marybel Soto Gomez, Hayley Darby, Sean W Graham

Genome Biol Evol· July 2021

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Exploring Angiosperms353: An open, community toolkit for collaborative phylogenomic research on flowering plants.
William J Baker, Steven Dodsworth, Félix Forest, Sean W Graham, Matthew G Johnson

Am J Bot· July 2021

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Exploring Angiosperms353: Developing and applying a universal toolkit for flowering plant phylogenomics.
Angela J McDonnell, William J Baker, Steven Dodsworth, Félix Forest, Sean W Graham

Appl Plant Sci· July 2021

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Discordant Phylogenomic Placement of Hydnoraceae and Lactoridaceae Within Piperales Using Data From All Three Genomes.
Matthias Jost, Marie-Stéphanie Samain, Isabel Marques, Sean W Graham, Stefan Wanke

Front Plant Sci· April 2021

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A bi-organellar phylogenomic study of Pandanales: inference of higher-order relationships and unusual rate-variation patterns.
Marybel Soto Gomez, Qianshi Lin, Eduardo da Silva Leal, Timothy J Gallaher, David Scherberich, Sean W Graham

Cladistics· October 2020

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Sequencing and Analyzing the Transcriptomes of a Thousand Species Across the Tree of Life for Green Plants.
Gane Ka-Shu Wong, Douglas E Soltis, Jim Leebens-Mack, Norman J Wickett, Michael S Barker, Sean W Graham

Annu Rev Plant Biol· April 2020

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Organellomic data sets confirm a cryptic consensus on (unrooted) land-plant relationships and provide new insights into bryophyte molecular evolution.
David Bell, Qianshi Lin, Wesley K Gerelle, Steve Joya, Ying Chang, Sean W Graham

Am J Bot· January 2020

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Corrigendum to "A comprehensive kelp phylogeny sheds light on the evolution of an ecosystem" [Mol. Phylogenet. Evol. 136 (2019) 138-150].
Samuel Starko, Marybel Soto Gomez, Hayley Darby, Kyle W Demes, Hiroshi Kawai, Sean W Graham

Mol Phylogenet Evol· November 2019

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A comprehensive kelp phylogeny sheds light on the evolution of an ecosystem.
Samuel Starko, Marybel Soto Gomez, Hayley Darby, Kyle W Demes, Hiroshi Kawai, Sean W Graham

Mol Phylogenet Evol· July 2019

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A Target Capture-Based Method to Estimate Ploidy From Herbarium Specimens.
Juan Viruel, María Conejero, Oriane Hidalgo, Lisa Pokorny, Robyn F Powell, Sean W Graham

Front Plant Sci· July 2019

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A customized nuclear target enrichment approach for developing a phylogenomic baseline for yams (Dioscoreaceae).
Marybel Soto Gomez, Lisa Pokorny, Michael B Kantar, Félix Forest, Ilia J Leitch, Sean W Graham

Appl Plant Sci· June 2019

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Monocot plastid phylogenomics, timeline, net rates of species diversification, the power of multi-gene analyses, and a functional model for the origin of monocots.
Thomas J Givnish, Alejandro Zuluaga, Daniel Spalink, Marybel Soto Gomez, Vivienne K Y Lam, Sean W Graham

Am J Bot· November 2018

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