Publications by authors named "Sebastien Smallwood"

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Preventing CpG hypermethylation in oocytes safeguards mouse development.
Yumiko K Kawamura, Evgeniy A Ozonov, Panagiotis Papasaikas, Takashi Kondo, Nhuong V Nguyen, Sebastien A Smallwood

Dev Cell· December 2025

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A scheduler for rhythmic gene expression.
Dimos Gaidatzis, Maike Graf-Landua, Stephen P Methot, Michaela Wölk, Giovanna Brancati, Sebastien Smallwood

Mol Syst Biol· December 2025

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A scheduler for rhythmic gene expression.
Dimos Gaidatzis, Maike Graf-Landua, Stephen P Methot, Michaela Wölk, Giovanna Brancati, Sebastien Smallwood

bioRxiv· September 2025

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A comprehensive Schizosaccharomyces pombe atlas of physical transcription factor interactions with proteins and chromatin.
Merle Skribbe, Charlotte Soneson, Michael B Stadler, Michaela Schwaiger, Vishnu N Suma Sreechakram, Sebastien A Smallwood

Mol Cell· April 2025

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DNA methylation modulates nucleosome retention in sperm and H3K4 methylation deposition in early mouse embryos.
Grigorios Fanourgakis, Laura Gaspa-Toneu, Pavel A Komarov, Panagiotis Papasaikas, Evgeniy A Ozonov, Sebastien A Smallwood

Nat Commun· January 2025

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Cohesin and CTCF control the dynamics of chromosome folding.
Pia Mach, Pavel I Kos, Yinxiu Zhan, Julie Cramard, Simon Gaudin, Sebastien Smallwood

Nat Genet· December 2022

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Nonlinear control of transcription through enhancer-promoter interactions.
Jessica Zuin, Gregory Roth, Yinxiu Zhan, Julie Cramard, Josef Redolfi, Sebastien Smallwood

Nature· April 2022

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Mechanical oscillations orchestrate axial patterning through Wnt activation in .
Jaroslav Ferenc, Panagiotis Papasaikas, Jacqueline Ferralli, Yukio Nakamura, Sebastien Smallwood

Sci Adv· December 2021

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BANP opens chromatin and activates CpG-island-regulated genes.
Ralph S Grand, Lukas Burger, Cathrin Gräwe, Alicia K Michael, Luke Isbel, Sébastien A Smallwood

Nature· August 2021

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The BTB-domain transcription factor ZBTB2 recruits chromatin remodelers and a histone chaperone during the exit from pluripotency.
Daniel Olivieri, Sujani Paramanathan, Anaïs F Bardet, Daniel Hess, Sébastien A Smallwood

J Biol Chem· August 2021

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Cooperation between HDAC3 and DAX1 mediates lineage restriction of embryonic stem cells.
Daniel Olivieri, Eleonora Castelli, Yumiko K Kawamura, Panagiotis Papasaikas, Ilya Lukonin, Sébastien A Smallwood

EMBO J· June 2021

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A genome-scale map of DNA methylation turnover identifies site-specific dependencies of DNMT and TET activity.
Paul Adrian Ginno, Dimos Gaidatzis, Angelika Feldmann, Leslie Hoerner, Dilek Imanci, Sébastien A Smallwood

Nat Commun· May 2020

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Multi-omics profiling of mouse gastrulation at single-cell resolution.
Ricard Argelaguet, Stephen J Clark, Hisham Mohammed, L Carine Stapel, Christel Krueger, Sebastien Smallwood

Nature· December 2019

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DamC reveals principles of chromatin folding in vivo without crosslinking and ligation.
Josef Redolfi, Yinxiu Zhan, Christian Valdes-Quezada, Mariya Kryzhanovska, Isabel Guerreiro, Sebastien A Smallwood

Nat Struct Mol Biol· June 2019

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Lysosomal Signaling Licenses Embryonic Stem Cell Differentiation via Inactivation of Tfe3.
Florian Villegas, Daphné Lehalle, Daniela Mayer, Melanie Rittirsch, Michael B Stadler, Sebastien A Smallwood

Cell Stem Cell· February 2019

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Genome-Wide Analysis of DNA Methylation in Single Cells Using a Post-bisulfite Adapter Tagging Approach.
Heather J Lee, Sébastien A Smallwood

Methods Mol Biol· July 2018

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Low Input Whole-Genome Bisulfite Sequencing Using a Post-Bisulfite Adapter Tagging Approach.
Julian R Peat, Sébastien A Smallwood

Methods Mol Biol· July 2018

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Genome-Scale Oscillations in DNA Methylation during Exit from Pluripotency.
Steffen Rulands, Heather J Lee, Stephen J Clark, Christof Angermueller, Sébastien A Smallwood

Cell Syst· July 2018

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Transcription and chromatin determinants of de novo DNA methylation timing in oocytes.
Lenka Gahurova, Shin-Ichi Tomizawa, Sébastien A Smallwood, Kathleen R Stewart-Morgan, Heba Saadeh

Epigenetics Chromatin· July 2017

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Genome-wide base-resolution mapping of DNA methylation in single cells using single-cell bisulfite sequencing (scBS-seq).
Stephen J Clark, Sébastien A Smallwood, Heather J Lee, Felix Krueger, Wolf Reik

Nat Protoc· March 2017

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Paternal chronic colitis causes epigenetic inheritance of susceptibility to colitis.
Markus Tschurtschenthaler, Priyadarshini Kachroo, Femke-Anouska Heinsen, Timon Erik Adolph, Malte Christoph Rühlemann, Sébastien Smallwood

Sci Rep· August 2016

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Single-cell epigenomics: powerful new methods for understanding gene regulation and cell identity.
Stephen J Clark, Heather J Lee, Sébastien A Smallwood, Gavin Kelsey, Wolf Reik

Genome Biol· April 2016

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Parallel single-cell sequencing links transcriptional and epigenetic heterogeneity.
Christof Angermueller, Stephen J Clark, Heather J Lee, Iain C Macaulay, Mabel J Teng, Sebastien Smallwood

Nat Methods· March 2016

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Dynamic changes in histone modifications precede de novo DNA methylation in oocytes.
Kathleen R Stewart, Lenka Veselovska, Jeesun Kim, Jiahao Huang, Heba Saadeh, Sébastien A Smallwood

Genes Dev· December 2015

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Erratum to: Deep sequencing and de novo assembly of the mouse occyte transcriptome define the contribution of transcription to the DNA methylation landscape.
Lena Veselovska, Sebastien A Smallwood, Heba Saadeh, Kathleen R Stewart, Felix Krueger

Genome Biol· December 2015

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