Publications by authors named "Sebastien Tempel"

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From a large-scale genomic analysis of insertion sequences to insights into their regulatory roles in prokaryotes.
Sebastien Tempel, Justin Bedo, Emmanuel Talla

BMC Genomics· June 2022

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Finding and Characterizing Repeats in Plant Genomes.
Jacques Nicolas, Sébastien Tempel, Anna-Sophie Fiston-Lavier, Emira Cherif

Methods Mol Biol· March 2022

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Shewanella decolorationis LDS1 Chromate Resistance.
Olivier N Lemaire, Flora A Honoré, Sébastien Tempel, Emma M Fortier, Silke Leimkühler

Appl Environ Microbiol· September 2019

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The chimeric nature of the genomes of marine magnetotactic coccoid-ovoid bacteria defines a novel group of Proteobacteria.
Boyang Ji, Sheng-Da Zhang, Wei-Jia Zhang, Zoe Rouy, François Alberto, Sébastien Tempel

Environ Microbiol· March 2017

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Distribution of Hydrogenases in Cyanobacteria: A Phylum-Wide Genomic Survey.
Vincenzo Puggioni, Sébastien Tempel, Amel Latifi

Front Genet· December 2016

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miRNAFold: a web server for fast miRNA precursor prediction in genomes.
Christophe Tav, Sébastien Tempel, Laurent Poligny, Fariza Tahi

Nucleic Acids Res· July 2016

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Finding and Characterizing Repeats in Plant Genomes.
Jacques Nicolas, Pierre Peterlongo, Sébastien Tempel

Methods Mol Biol· May 2016

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miRBoost: boosting support vector machines for microRNA precursor classification.
Van Du T Tran, Sebastien Tempel, Benjamin Zerath, Farida Zehraoui, Fariza Tahi

RNA· May 2015

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VisualTE: a graphical interface for transposable element analysis at the genomic scale.
Sébastien Tempel, Emmanuel Talla

BMC Genomics· February 2015

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Visual ModuleOrganizer: a graphical interface for the detection and comparative analysis of repeat DNA modules.
Sebastien Tempel, Emmanuel Talla

Mob DNA· August 2014

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Effects of a sulfonylurea herbicide on the soil bacterial community.
Dallel Arabet, Sébastien Tempel, Michel Fons, Yann Denis, Cécile Jourlin-Castelli

Environ Sci Pollut Res Int· April 2014

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ncRNAclassifier: a tool for detection and classification of transposable element sequences in RNA hairpins.
Sébastien Tempel, Nicolas Pollet, Fariza Tahi

BMC Bioinformatics· September 2012

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A fast ab-initio method for predicting miRNA precursors in genomes.
Sébastien Tempel, Fariza Tahi

Nucleic Acids Res· June 2012

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Using and understanding RepeatMasker.
Sébastien Tempel

Methods Mol Biol· June 2012

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ModuleOrganizer: detecting modules in families of transposable elements.
Sebastien Tempel, Christine Rousseau, Fariza Tahi, Jacques Nicolas

BMC Bioinformatics· September 2010

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Simple and fast classification of non-LTR retrotransposons based on phylogeny of their RT domain protein sequences.
Vladimir V Kapitonov, Sébastien Tempel, Jerzy Jurka

Gene· December 2009

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VisualRepbase: an interface for the study of occurrences of transposable element families.
Sébastien Tempel, Matthew Jurka, Jerzy Jurka

BMC Bioinformatics· August 2008

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Model-based identification of Helitrons results in a new classification of their families in Arabidopsis thaliana.
Sébastien Tempel, Jacques Nicolas, Abdelhak El Amrani, Ivan Couée

Gene· November 2007

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Domain organization within repeated DNA sequences: application to the study of a family of transposable elements.
Sébastien Tempel, Mathieu Giraud, Dominique Lavenier, Israël-César Lerman, Anne-Sophie Valin

Bioinformatics· August 2006

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Suffix-tree analyser (STAN): looking for nucleotidic and peptidic patterns in chromosomes.
Jacques Nicolas, Patrick Durand, Grégory Ranchy, Sébastien Tempel, Anne-Sophie Valin

Bioinformatics· December 2005

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