Publications by authors named "Severin Uebbing"

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Resolving the three-dimensional interactome of human accelerated regions during human and chimpanzee neurodevelopment.
Atreyo Pal, Mark A Noble, Matheo Morales, Richik Pal, Marybeth Baumgartner, Je Won Yang, Kristina M Yim, Severin Uebbing, James P Noonan

Cell· March 2025

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Author Correction: CpG island turnover events predict evolutionary changes in enhancer activity.
Acadia A Kocher, Emily V Dutrow, Severin Uebbing, Kristina M Yim, María F Rosales Larios

Genome Biol· October 2025

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Resolving the three-dimensional interactome of human accelerated regions during human and chimpanzee neurodevelopment.
Atreyo Pal, Mark A Noble, Matheo Morales, Richik Pal, Marybeth Baumgartner, Severin Uebbing

Cell· July 2025

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Evolutionary Innovations in Conserved Regulatory Elements Associate With Developmental Genes in Mammals.
Severin Uebbing, Acadia A Kocher, Marybeth Baumgartner, Yu Ji, Suxia Bai

Mol Biol Evol· October 2024

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Resolving the three-dimensional interactome of Human Accelerated Regions during human and chimpanzee neurodevelopment.
Atreyo Pal, Mark A Noble, Matheo Morales, Richik Pal, Marybeth Baumgartner, Severin Uebbing

bioRxiv· July 2024

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CpG island turnover events predict evolutionary changes in enhancer activity.
Acadia A Kocher, Emily V Dutrow, Severin Uebbing, Kristina M Yim, María F Rosales Larios

Genome Biol· June 2024

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Massively parallel disruption of enhancers active in human neural stem cells.
Evan Geller, Mark A Noble, Matheo Morales, Jake Gockley, Deena Emera, Severin Uebbing

Cell Rep· February 2024

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Evolutionary innovation in conserved regulatory elements across the mammalian tree of life.
Severin Uebbing, Acadia A Kocher, Marybeth Baumgartner, Yu Ji, Suxia Bai

bioRxiv· January 2024

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CpG island turnover events predict evolutionary changes in enhancer activity.
Acadia A Kocher, Emily V Dutrow, Severin Uebbing, Kristina M Yim, María F Rosales Larios

bioRxiv· May 2023

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A systems biology approach identifies the role of dysregulated PRDM6 in the development of hypertension.
Kushan L Gunawardhana, Lingjuan Hong, Trojan Rugira, Severin Uebbing, Joanna Kucharczak

J Clin Invest· February 2023

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Modeling uniquely human gene regulatory function via targeted humanization of the mouse genome.
Emily V Dutrow, Deena Emera, Kristina Yim, Severin Uebbing, Acadia A Kocher

Nat Commun· January 2022

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Massively parallel discovery of human-specific substitutions that alter enhancer activity.
Severin Uebbing, Jake Gockley, Steven K Reilly, Acadia A Kocher, Evan Geller

Proc Natl Acad Sci U S A· January 2021

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Transcriptome-Wide Patterns of the Genetic and Expression Variations in Two Sympatric Schizothoracine Fishes in a Tibetan Plateau Glacier Lake.
Juan Chen, Liandong Yang, Renyi Zhang, Severin Uebbing, Cunfang Zhang

Genome Biol Evol· January 2020

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RPASE: Individual-based allele-specific expression detection without prior knowledge of haplotype phase.
Mi Wang, Severin Uebbing, Yudi Pawitan, Douglas G Scofield

Mol Ecol Resour· November 2018

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Disrupting the three-dimensional regulatory topology of the locus results in overtly normal development.
Richard Sarro, Acadia A Kocher, Deena Emera, Severin Uebbing, Emily V Dutrow

Development· April 2018

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Bayesian Inference of Allele-Specific Gene Expression Indicates Abundant Cis-Regulatory Variation in Natural Flycatcher Populations.
Mi Wang, Severin Uebbing, Hans Ellegren

Genome Biol Evol· May 2017

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Divergence in gene expression within and between two closely related flycatcher species.
Severin Uebbing, Axel Künstner, Hannu Mäkinen, Niclas Backström, Paulina Bolivar

Mol Ecol· May 2016

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Quantitative Mass Spectrometry Reveals Partial Translational Regulation for Dosage Compensation in Chicken.
Severin Uebbing, Anne Konzer, Luohao Xu, Niclas Backström, Björn Brunström

Mol Biol Evol· October 2015

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Evolutionary analysis of the female-specific avian W chromosome.
Linnéa Smeds, Vera Warmuth, Paulina Bolivar, Severin Uebbing, Reto Burri

Nat Commun· June 2015

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Genomic identification and characterization of the pseudoautosomal region in highly differentiated avian sex chromosomes.
Linnéa Smeds, Takeshi Kawakami, Reto Burri, Paulina Bolivar, Arild Husby, Severin Uebbing

Nat Commun· November 2014

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Transcriptome sequencing reveals the character of incomplete dosage compensation across multiple tissues in flycatchers.
Severin Uebbing, Axel Künstner, Hannu Mäkinen, Hans Ellegren

Genome Biol Evol· December 2013

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The genomic landscape of species divergence in Ficedula flycatchers.
Hans Ellegren, Linnéa Smeds, Reto Burri, Pall I Olason, Niclas Backström, Severin Uebbing

Nature· November 2012

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Sequencing of the needle transcriptome from Norway spruce (Picea abies Karst L.) reveals lower substitution rates, but similar selective constraints in gymnosperms and angiosperms.
Jun Chen, Severin Uebbing, Niclas Gyllenstrand, Ulf Lagercrantz, Martin Lascoux

BMC Genomics· November 2012

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