Publications by authors named "Shahid Akbar"

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Deep‑learning based osteoporosis classification in knee X‑rays using transfer‑learning approach.
Muhammad Bilal Qureshi, Muhammad Sani, Ali Raza, Muhammad Shuaib Qureshi, Wajdi Alghamdi, Shahid Akbar

Sci Rep· November 2025

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Two-Dimensional Electrically Conductive Metal-Organic Frameworks: Insights and Guidelines from Theory.
Shogo Nakaza, Yuliang Shi, Zeyu Zhang, Shahid Akbar, Farnaz A Shakib

Acc Chem Res· October 2025

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Comparative Outcomes of Limb Salvage Surgery Versus Amputation in Osteosarcoma: A Five-Year Follow-Up Study From a Tertiary Care Center.
Farhad Ullah, Waheed Altaf, Danish Khan, Noman Alam Khan, Shahid Akbar

Cureus· October 2025

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Accelerating Prediction of Antiviral Peptides Using Genetic Algorithm-Based Weighted Multiperspective Descriptors with Self-Normalized Deep Networks.
Shahid Akbar, Ali Raza, Quan Zou, Wajdi Alghamdi, Xiaorui Kang

J Chem Inf Model· September 2025

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pACPs-DNN: Predicting anticancer peptides using novel peptide transformation into evolutionary and structure matrix-based images with self-attention deep learning model.
Shahid, Maqsood Hayat, Ali Raza, Shahid Akbar, Wajdi Alghamdi

Comput Biol Chem· August 2025

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DeepAIPs-SFLA: Deep Convolutional Model for Prediction of Anti-Inflammatory Peptides Using Binary Pattern Decomposition of Novel Multiview Descriptors with an SFLA Approach.
Shahid Akbar, Ali Raza, Wajdi Alghamdi, Aamir Saeed, Hashim Ali

ACS Omega· August 2025

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JCMM Annual Review on Advances in Biotechnology for the Treatment of Haematological Malignancies: A Review of the Latest In-Patient Developments 2024-2025.
Akbar M Shahid, William Vainchenker, Stefan N Constantinescu

J Cell Mol Med· July 2025

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pNPs-CapsNet: Predicting Neuropeptides Using Protein Language Models and FastText Encoding-Based Weighted Multi-View Feature Integration with Deep Capsule Neural Network.
Shahid Akbar, Ali Raza, Hamid Hussain Awan, Quan Zou, Wajdi Alghamdi

ACS Omega· April 2025

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pACP-HybDeep: predicting anticancer peptides using binary tree growth based transformer and structural feature encoding with deep-hybrid learning.
Shahid, Maqsood Hayat, Wajdi Alghamdi, Shahid Akbar, Ali Raza

Sci Rep· January 2025

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DeepAIPs-Pred: Predicting Anti-Inflammatory Peptides Using Local Evolutionary Transformation Images and Structural Embedding-Based Optimal Descriptors with Self-Normalized BiTCNs.
Shahid Akbar, Matee Ullah, Ali Raza, Quan Zou, Wajdi Alghamdi

J Chem Inf Model· December 2024

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Catalog of the Neuropterida of India (Insecta: Neuroptera, Megaloptera, Raphidioptera).
Aijaz Ahmad Wachkoo, Simarjit Kaur, Shahid Ali Akbar, Muhammad Asghar Hassan, Manpreet Singh Pandher

Zootaxa· December 2024

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Human DNA polymerase ε is a source of C>T mutations at CpG dinucleotides.
Marketa Tomkova, Michael John McClellan, Gilles Crevel, Akbar Muhammed Shahid, Nandini Mozumdar

Nat Genet· November 2024

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TargetCLP: clathrin proteins prediction combining transformed and evolutionary scale modeling-based multi-view features via weighted feature integration approach.
Matee Ullah, Shahid Akbar, Ali Raza, Kashif Ahmad Khan, Quan Zou

Brief Bioinform· November 2024

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A hybrid residue based sequential encoding mechanism with XGBoost improved ensemble model for identifying 5-hydroxymethylcytosine modifications.
Islam Uddin, Hamid Hussain Awan, Majdi Khalid, Salman Khan, Shahid Akbar

Sci Rep· September 2024

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StackedEnC-AOP: prediction of antioxidant proteins using transform evolutionary and sequential features based multi-scale vector with stacked ensemble learning.
Gul Rukh, Shahid Akbar, Gauhar Rehman, Fawaz Khaled Alarfaj, Quan Zou

BMC Bioinformatics· August 2024

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iAFPs-Mv-BiTCN: Predicting antifungal peptides using self-attention transformer embedding and transform evolutionary based multi-view features with bidirectional temporal convolutional networks.
Shahid Akbar, Quan Zou, Ali Raza, Fawaz Khaled Alarfaj

Artif Intell Med· May 2024

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DeepAVP-TPPred: identification of antiviral peptides using transformed image-based localized descriptors and binary tree growth algorithm.
Matee Ullah, Shahid Akbar, Ali Raza, Quan Zou

Bioinformatics· May 2024

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Deepstacked-AVPs: predicting antiviral peptides using tri-segment evolutionary profile and word embedding based multi-perspective features with deep stacking model.
Shahid Akbar, Ali Raza, Quan Zou

BMC Bioinformatics· March 2024

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AIPs-SnTCN: Predicting Anti-Inflammatory Peptides Using fastText and Transformer Encoder-Based Hybrid Word Embedding with Self-Normalized Temporal Convolutional Networks.
Ali Raza, Jamal Uddin, Abdullah Almuhaimeed, Shahid Akbar, Quan Zou

J Chem Inf Model· November 2023

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NUC-7738 regulates β-catenin signalling resulting in reduced proliferation and self-renewal of AML cells.
Akbar Muhammed Shahid, In Hwa Um, Mustafa Elshani, Ying Zhang, David James Harrison

PLoS One· December 2022

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cACP-DeepGram: Classification of anticancer peptides via deep neural network and skip-gram-based word embedding model.
Shahid Akbar, Maqsood Hayat, Muhammad Tahir, Salman Khan, Fawaz Khaled Alarfaj

Artif Intell Med· September 2022

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AFP-CMBPred: Computational identification of antifreeze proteins by extending consensus sequences into multi-blocks evolutionary information.
Farman Ali, Shahid Akbar, Ali Ghulam, Zulfikar Ahmed Maher, Ahsanullah Unar

Comput Biol Med· December 2021

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iAtbP-Hyb-EnC: Prediction of antitubercular peptides via heterogeneous feature representation and genetic algorithm based ensemble learning model.
Shahid Akbar, Ashfaq Ahmad, Maqsood Hayat, Ateeq Ur Rehman, Salman Khan

Comput Biol Med· October 2021

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First record of the myrmicine ant genus Syllophopsis Santschi, 1915 (Hymenoptera: Formicidae) from India with description of a new species.
Shahid Ali Akbar, Himender Bharti, Mariusz Kanturski, Aijaz Ahmad Wachkoo

Zootaxa· June 2021

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The Ants (Hymenoptera, Formicidae) of Sri Lanka: a taxonomic research summary and updated checklist.
Ratnayake Kaluarachchige Sriyani Dias, Benoit Guénard, Shahid Ali Akbar, Evan P Economo, Warnakulasuriyage Sudesh Udayakantha

Zookeys· September 2020

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