Publications by authors named "Shankar Srinivas"

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Calcium signaling is required for anterior patterning in the mouse embryo.
Matthew J Stower, Richard C V Tyser, Shifaan Thowfeequ, Felix Zhou, Marta Portela, Shankar Srinivas

PLoS Biol· October 2025

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Protocol for lattice light-sheet time-lapse imaging of early post-implantation mouse embryos.
Shifaan Thowfeequ, Helena Coker, Marco Fritzsche, Shankar Srinivas

STAR Protoc· October 2025

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Origin, fate and function of extraembryonic tissues during mammalian development.
Shifaan Thowfeequ, Courtney W Hanna, Shankar Srinivas

Nat Rev Mol Cell Biol· April 2025

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Chromatin remodeller Chd7 is developmentally regulated in the neural crest by tissue-specific transcription factors.
Ruth M Williams, Guneş Taylor, Irving T C Ling, Ivan Candido-Ferreira, Daniel M Fountain, Shankar Srinivas

PLoS Biol· October 2024

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An integrated approach identifies the molecular underpinnings of murine anterior visceral endoderm migration.
Shifaan Thowfeequ, Jonathan Fiorentino, Di Hu, Maria Solovey, Sharon Ruane, Shankar Srinivas

Dev Cell· September 2024

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CIARA: a cluster-independent algorithm for identifying markers of rare cell types from single-cell sequencing data.
Gabriele Lubatti, Marco Stock, Ane Iturbide, Mayra L Ruiz Tejada Segura, Melina Riepl, Shankar Srinivas

Development· June 2023

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Extraembryonic tissues: exploring concepts, definitions and functions across the animal kingdom.
Guojun Sheng, Thorsten E Boroviak, Urs Schmidt-Ott, Shankar Srinivas

Philos Trans R Soc Lond B Biol Sci· December 2022

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Embryonic and extraembryonic tissues during mammalian development: shifting boundaries in time and space.
Shifaan Thowfeequ, Shankar Srinivas

Philos Trans R Soc Lond B Biol Sci· December 2022

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Recent advances in understanding cell types during human gastrulation.
Richard C V Tyser, Shankar Srinivas

Semin Cell Dev Biol· November 2022

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Dynamic enlargement and mobilization of lipid droplets in pluripotent cells coordinate morphogenesis during mouse peri-implantation development.
King Hang Tommy Mau, Donja Karimlou, David Barneda, Vincent Brochard, Christophe Royer, Shankar Srinivas

Nat Commun· July 2022

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Epithelial dynamics during early mouse development.
Shifaan Thowfeequ, Matthew J Stower, Shankar Srinivas

Curr Opin Genet Dev· February 2022

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ASPP2 maintains the integrity of mechanically stressed pseudostratified epithelia during morphogenesis.
Christophe Royer, Elizabeth Sandham, Elizabeth Slee, Falk Schneider, Christoffer B Lagerholm, Shankar Srinivas

Nat Commun· February 2022

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Single-cell transcriptomic characterization of a gastrulating human embryo.
Richard C V Tyser, Elmir Mahammadov, Shota Nakanoh, Ludovic Vallier, Antonio Scialdone, Shankar Srinivas

Nature· December 2021

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Advances in live imaging early mouse development: exploring the researcher's interdisciplinary toolkit.
Matthew J Stower, Shankar Srinivas

Development· September 2021

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Cell competition acts as a purifying selection to eliminate cells with mitochondrial defects during early mouse development.
Ana Lima, Gabriele Lubatti, Jörg Burgstaller, Di Hu, Alistair P Green, Shankar Srinivas

Nat Metab· August 2021

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Characterization of a common progenitor pool of the epicardium and myocardium.
Richard C V Tyser, Ximena Ibarra-Soria, Katie McDole, Satish Arcot Jayaram, Jonathan Godwin, Shankar Srinivas

Science· March 2021

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Characterization of embryonic surface ectoderm cell protrusions.
Cecília G Magalhães, Maraysa de Oliveira-Melo, Mario C Cruz, Shankar Srinivas, C Y Irene Yan

Dev Dyn· February 2021

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Asymmetry in the frequency and position of mitosis in the mouse embryo epiblast at gastrulation.
Navrita Mathiah, Evangéline Despin-Guitard, Matthew Stower, Wallis Nahaboo, Sema Elif Eski, Shankar Srinivas

EMBO Rep· November 2020

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Spatial protein analysis in developing tissues: a sampling-based image processing approach.
Karolis Leonavicius, Christophe Royer, Antonio M A Miranda, Richard C V Tyser, Annemarie Kip, Shankar Srinivas

Philos Trans R Soc Lond B Biol Sci· October 2020

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Establishment of a relationship between blastomere geometry and YAP localisation during compaction.
Christophe Royer, Karolis Leonavicius, Annemarie Kip, Deborah Fortin, Kirtirupa Nandi, Shankar Srinivas

Development· October 2020

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The First Heartbeat-Origin of Cardiac Contractile Activity.
Richard C V Tyser, Shankar Srinivas

Cold Spring Harb Perspect Biol· July 2020

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Hippo Enters the Competition.
Christophe Royer, Shankar Srinivas

Dev Cell· July 2019

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A single-cell molecular map of mouse gastrulation and early organogenesis.
Blanca Pijuan-Sala, Jonathan A Griffiths, Carolina Guibentif, Tom W Hiscock, Wajid Jawaid, Shankar Srinivas

Nature· February 2019

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Peristaltic Elastic Instability in an Inflated Cylindrical Channel.
Nontawit Cheewaruangroj, Karolis Leonavicius, Shankar Srinivas, John S Biggins

Phys Rev Lett· February 2019

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Mechanics of mouse blastocyst hatching revealed by a hydrogel-based microdeformation assay.
Karolis Leonavicius, Christophe Royer, Chris Preece, Benjamin Davies, John S Biggins, Shankar Srinivas

Proc Natl Acad Sci U S A· October 2018

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