Publications by authors named "Shantanu Gupta"

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Validation of Lung [F]FDG Uptake as a Quantitative PET Biomarker for Influenza-Associated Pulmonary Inflammation.
Carla Bianca Luena Victorio, Shantanu Gupta, Arun Ganasarajah, Joanne Ong, Ann-Marie Chacko

Mol Imaging Biol· November 2025

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Predicting Important Photons for Energy-Efficient Single-Photon Videography.
Shantanu Gupta, Varun Sundar, Lucas J Koerner, Claudio Bruschini, Edoardo Charbon, Mohit Gupta

IEEE Trans Pattern Anal Mach Intell· August 2025

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Targeting NSCLC drug resistance: Systems biology insights into the MALAT1/miR-145-5p axis and Wip1 in regulating ferroptosis and apoptosis.
Shantanu Gupta, Daner Acunha Silveira, José Carlos Mombach, Ronaldo F Hashimoto

J R Soc Interface· May 2025

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Completing the Picture: Reaffirming the Methodology, Results, and Limitations of the HAA Accident Analysis Article.
Shantanu Gupta, Gustavo Sanchez, Mary E Johnson

Air Med J· May 2025

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DNA Damage-Induced Ferroptosis: A Boolean Model Regulating p53 and Non-Coding RNAs in Drug Resistance.
Shantanu Gupta, Daner A Silveira, José Carlos M Mombach, Ronaldo F Hashimoto

Proteomes· January 2025

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Analysis of Helicopter Air Ambulance Accidents in the United States From 2010 to 2021.
Gustavo Sanchez, Shantanu Gupta, Mary E Johnson

Air Med J· December 2024

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LncRNA PTENP1/miR-21/PTEN Axis Modulates EMT and Drug Resistance in Cancer: Dynamic Boolean Modeling for Cell Fates in DNA Damage Response.
Shantanu Gupta, Daner A Silveira, Pedro R Lorenzoni, Jose Carlos M Mombach, Ronaldo F Hashimoto

Int J Mol Sci· July 2024

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A dynamic Boolean network reveals that the BMI1 and MALAT1 axis is associated with drug resistance by limiting miR-145-5p in non-small cell lung cancer.
Shantanu Gupta, Daner A Silveira, Gabriel P S Piedade, Miguel P Ostrowski, José Carlos M Mombach

Noncoding RNA Res· March 2024

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PTEN expression can be used as a switch between senescence and apoptosis in breast cancer cells according to a logical model of the G2/M checkpoint.
Yolanda M B Marcello, Daner A Silveira, Shantanu Gupta, José Carlos M Mombach

Biosystems· January 2024

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The lncRNA DLX6-AS1/miR-16-5p axis regulates autophagy and apoptosis in non-small cell lung cancer: A Boolean model of cell death.
Shantanu Gupta, Daner A Silveira, José Carlos M Mombach, Ronaldo F Hashimoto

Noncoding RNA Res· December 2023

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A Boolean model of the oncogene role of FAM111B in lung adenocarcinoma.
Shantanu Gupta, Daner A Silveira, Ronaldo F Hashimoto

Comput Biol Chem· October 2023

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A logical model of Ewing sarcoma cell epithelial-to-mesenchymal transition supports the existence of hybrid cellular phenotypes.
Daner A Silveira, Shantanu Gupta, Mariane da Cunha Jaeger, Caroline Brunetto de Farias, José Carlos Merino Mombach

FEBS Lett· October 2023

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Quadra-Stable Dynamics of p53 and PTEN in the DNA Damage Response.
Shantanu Gupta, Pritam Kumar Panda, Daner A Silveira, Rajeev Ahuja, Ronaldo F Hashimoto

Cells· April 2023

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A comparison of sutureless flanged fixation and 4-point Gore-Tex fixation for scleral-fixated intraocular lenses: a pilot study.
Usha K Raina, Brajesh Kumar, Shruti Bhattacharya, Varun Saini, Shantanu Kumar Gupta

Digit J Ophthalmol· November 2022

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Network analysis reveals that the tumor suppressor lncRNA GAS5 acts as a double-edged sword in response to DNA damage in gastric cancer.
Shantanu Gupta, Pritam Kumar Panda, Wei Luo, Ronaldo F Hashimoto, Rajeev Ahuja

Sci Rep· October 2022

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The Wnt pathway can stabilize hybrid phenotypes in the epithelial-mesenchymal transition: A logical modeling approach.
Daner Acunha Silveira, Shantanu Gupta, Marialva Sinigaglia, José Carlos Merino Mombach

Comput Biol Chem· August 2022

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Dynamical modeling of miR-34a, miR-449a, and miR-16 reveals numerous DDR signaling pathways regulating senescence, autophagy, and apoptosis in HeLa cells.
Shantanu Gupta, Pritam Kumar Panda, Ronaldo F Hashimoto, Shailesh Kumar Samal, Suman Mishra

Sci Rep· March 2022

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Dynamical Analysis of a Boolean Network Model of the Oncogene Role of lncRNA ANRIL and lncRNA UFC1 in Non-Small Cell Lung Cancer.
Shantanu Gupta, Ronaldo F Hashimoto

Biomolecules· March 2022

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A Boolean Model of the Proliferative Role of the lncRNA XIST in Non-Small Cell Lung Cancer Cells.
Shantanu Gupta, Daner A Silveira, Ronaldo F Hashimoto, Jose Carlos M Mombach

Biology (Basel)· March 2022

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Derivation and validation of gray-box models to estimate noninvasive in-vivo percentage glycated hemoglobin using digital volume pulse waveform.
Shifat Hossain, Shantanu Sen Gupta, Tae-Ho Kwon, Ki-Doo Kim

Sci Rep· June 2021

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Towards DNA-damage induced autophagy: A Boolean model of p53-induced cell fate mechanisms.
Shantanu Gupta, Daner A Silveira, José Carlos M Mombach

DNA Repair (Amst)· December 2020

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Systems biology approach suggests new miRNAs as phenotypic stability factors in the epithelial-mesenchymal transition.
Daner A Silveira, Shantanu Gupta, José Carlos M Mombach

J R Soc Interface· October 2020

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Integrative data modeling from lung and lymphatic cancer predicts functional roles for miR-34a and miR-16 in cell fate regulation.
Shantanu Gupta, Daner A Silveira, Florencia M Barbé-Tuana, José Carlos M Mombach

Sci Rep· February 2020

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Comparison of Plusoptix S12R photoscreener with cycloplegic retinoscopy and autorefraction in pediatric age group.
Varun Saini, Usha K Raina, Anika Gupta, Jawahar Lal Goyal, Raffat Anjum, Shantanu Kumar Gupta

Indian J Ophthalmol· October 2019

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Comparison of Manual Capsulorhexis and 25-Gauge Vitrectorhexis in Pediatric Cataract Surgery: A Pilot Study.
Usha K Raina, Raffat Anjum, Shantanu Kumar Gupta, Brajesh Kumar, Varun Saini

J Pediatr Ophthalmol Strabismus· September 2019

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