Publications by authors named "Shaoping Shi"

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Generating long-term stable squeezed states via multiple pump noise suppression.
Li Gao, Shaoping Shi, Bo Lu, Li-Ang Zheng, Long Tian

Opt Lett· August 2025

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Uncertainty Quantification and Temperature Scaling Calibration for Protein-RNA Binding Site Prediction.
Ximin Zeng, Hongmei Wang, Long Zhao, Yue Cheng, Danping Zhou, Shaoping Shi

J Chem Inf Model· June 2025

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Reservoir-Engineered Squeezed Lasing through the Parametric Coupling.
Yuhang Tian, Yajun Wang, Weijie Wang, Xiaocong Sun, Yuhang Li, Shaoping Shi

Phys Rev Lett· June 2025

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Laser intensity noise suppression for space-borne gravitational wave mission.
Fan Li, Xin Shang, Zhenglei Ma, Jiawei Wang, Long Tian, Shaoping Shi

Opt Express· June 2025

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CoNglyPred: Accurate Prediction of N-Linked Glycosylation Sites Using ESM-2 and Structural Features With Graph Network and Co-Attention.
Hongmei Wang, Long Zhao, Ziyuan Yu, Ximin Zeng, Shaoping Shi

Proteomics· March 2025

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PocketDTA: an advanced multimodal architecture for enhanced prediction of drug-target affinity from 3D structural data of target binding pockets.
Long Zhao, Hongmei Wang, Shaoping Shi

Bioinformatics· October 2024

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Generation of squeezed vacuum state in the millihertz frequency band.
Li Gao, Li-Ang Zheng, Bo Lu, Shaoping Shi, Long Tian

Light Sci Appl· October 2024

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PhosAF: An integrated deep learning architecture for predicting protein phosphorylation sites with AlphaFold2 predicted structures.
Ziyuan Yu, Jialin Yu, Hongmei Wang, Shuai Zhang, Long Zhao, Shaoping Shi

Anal Biochem· July 2024

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STAGAN: An approach for improve the stability of molecular graph generation based on generative adversarial networks.
Jinping Zou, Jialin Yu, Pengwei Hu, Long Zhao, Shaoping Shi

Comput Biol Med· December 2023

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Generation of focused drug molecule library using recurrent neural network.
Jinping Zou, Long Zhao, Shaoping Shi

J Mol Model· November 2023

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Generating six pairs of bandwidth-expanded entangled sideband modes via time delay compensation.
Shaoping Shi, Yimiao Wu, Li Gao, Li-Ang Zheng, Long Tian

Opt Lett· June 2023

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DeepGpgs: a novel deep learning framework for predicting arginine methylation sites combined with Gaussian prior and gated self-attention mechanism.
Haiwei Zhou, Wenxi Tan, Shaoping Shi

Brief Bioinform· March 2023

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De novo drug design based on Stack-RNN with multi-objective reward-weighted sum and reinforcement learning.
Pengwei Hu, Jinping Zou, Jialin Yu, Shaoping Shi

J Mol Model· March 2023

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Overcoming the inadaptability of sparse group lasso for data with various group structures by stacking.
Huan He, Xinyun Guo, Jialin Yu, Chen Ai, Shaoping Shi

Bioinformatics· March 2022

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PKSPS: a novel method for predicting kinase of specific phosphorylation sites based on maximum weighted bipartite matching algorithm and phosphorylation sequence enrichment analysis.
Xinyun Guo, Huan He, Jialin Yu, Shaoping Shi

Brief Bioinform· January 2022

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Entangled sideband control scheme via frequency-comb-type seed beam.
Long Tian, Shaoping Shi, Yuhang Li, Yimiao Wu, Wei Li

Opt Lett· August 2021

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DeepCLA: A Hybrid Deep Learning Approach for the Identification of Clathrin.
Ju Zhang, Jialin Yu, Dan Lin, Xinyun Guo, Huan He, Shaoping Shi

J Chem Inf Model· January 2021

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Demonstration of Channel Multiplexing Quantum Communication Exploiting Entangled Sideband Modes.
Shaoping Shi, Long Tian, Yajun Wang, Yaohui Zheng, Changde Xie

Phys Rev Lett· August 2020

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Observation of a comb of squeezed states with a strong squeezing factor by a bichromatic local oscillator.
Shaoping Shi, Yajun Wang, Long Tian, Jinrong Wang, Xiaocong Sun

Opt Lett· April 2020

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Computational prediction and analysis of species-specific fungi phosphorylation via feature optimization strategy.
Man Cao, Guodong Chen, Jialin Yu, Shaoping Shi

Brief Bioinform· March 2020

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PredGly: predicting lysine glycation sites for Homo sapiens based on XGboost feature optimization.
Jialin Yu, Shaoping Shi, Fang Zhang, Guodong Chen, Man Cao

Bioinformatics· August 2019

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Dependence of the squeezing and anti-squeezing factors of bright squeezed light on the seed beam power and pump beam noise.
Xiaocong Sun, Yajun Wang, Long Tian, Shaoping Shi, Yaohui Zheng

Opt Lett· April 2019

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Prediction and functional analysis of prokaryote lysine acetylation site by incorporating six types of features into Chou's general PseAAC.
Guodong Chen, Man Cao, Jialin Yu, Xinyun Guo, Shaoping Shi

J Theor Biol· January 2019

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ProAcePred: prokaryote lysine acetylation sites prediction based on elastic net feature optimization.
Guodong Chen, Man Cao, Kun Luo, Lina Wang, Pingping Wen, Shaoping Shi

Bioinformatics· December 2018

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Detection and perfect fitting of 13.2  dB squeezed vacuum states by considering green-light-induced infrared absorption.
Shaoping Shi, Yajun Wang, Wenhai Yang, Yaohui Zheng, Kunchi Peng

Opt Lett· November 2018

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