Publications by authors named "Shashank Yadav"

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Graph-spa: A Spatiotemporal Graph Neural Network based framework for ARDS prediction and interpretability.
Shashank Yadav, Molly Douglas, Jarrod Mosier, Vignesh Subbian

J Biomed Inform· December 2025

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graphB3-an interpretable graph learning approach for predicting blood-brain barrier permeability.
Sumit Kumar, Shashank Yadav, Dhvani Sandip Vora, Prateek Paul, Jaspreet Kaur Dhanjal

Brief Bioinform· November 2025

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SHREC: A Framework for Advancing Next-Generation Computational Phenotyping with Large Language Models.
Sarah A Pungitore, Shashank Yadav, Molly Douglas, Jarrod Mosier, Vignesh Subbian

ArXiv· August 2025

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The MRI Spectrum in Shoulder Injuries: A Cross-Sectional Study.
Shashank Yadav, Ashok K Sharma, Parinita Sadhanidar, Sana Karim

Cureus· August 2025

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Lightweight Language Models are Prone to Reasoning Errors for Complex Computational Phenotyping Tasks.
Shashank Yadav, David Maughan, Vignesh Subbian

ArXiv· July 2025

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Deciphering ABA/PYL gene family in flax: evolutionary analysis, and abiotic stress response.
Shashank Kumar Yadav, Ankit Saroha, Devender Singh, Pragya Yadav, Dhammaprakash Pandhari Wankhede

Plant Cell Rep· June 2025

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Identification and Validation of New Molecular Subtypes within the Early and Late Mild Cognitive Impairment Stages of Alzheimer's Disease.
Bowei Li, Shashank Yadav, Shu Zhou, Yuheng Du, Leyuan Qian

medRxiv· May 2025

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TCR-ESM: Employing protein language embeddings to predict TCR-peptide-MHC binding.
Shashank Yadav, Dhvani Sandip Vora, Durai Sundar, Jaspreet Kaur Dhanjal

Comput Struct Biotechnol J· December 2024

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Author Correction: Leveraging genetic resource diversity and identification of trait-enriched superior genotypes for accelerated improvement in linseed (Linum usitatissimum L.).
Vikender Kaur, Sunil S Gomashe, Shashank K Yadav, Devender Singh, Sheela

Sci Rep· November 2024

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Utilization of and genes for molecular discernment of ' Phytoplasma australasiaticum' strain associated with linseed germplasm in India.
Shashank Kumar Yadav, Devender Singh, Lakshman Prasad, Balram Jat, Govind Pratap Rao

3 Biotech· September 2024

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Leveraging genetic resource diversity and identification of trait-enriched superior genotypes for accelerated improvement in linseed (Linum usitatissimum L.).
Vikender Kaur, Sunil S Gomashe, Shashank K Yadav, Devender Singh, Sheela

Sci Rep· August 2024

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Deep learning and transfer learning identify breast cancer survival subtypes from single-cell imaging data.
Shashank Yadav, Shu Zhou, Bing He, Yuheng Du, Lana X Garmire

Commun Med (Lond)· December 2023

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A Versatile Protocol for Efficient Transformation and Regeneration in Mega Rice Cultivar MTU1010: Optimization through Hormonal Variables.
Pragya Yadav, V V Santosh Kumar, Jyoti Priya, Shashank Kumar Yadav, Shivani Nagar

Methods Protoc· November 2023

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Deep-learning and transfer learning identify new breast cancer survival subtypes from single-cell imaging data.
Shashank Yadav, Shu Zhou, Bing He, Yuheng Du, Lana X Garmire

medRxiv· September 2023

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Diversity of genetic resources in global genebanks: from agro-morphological characterisation to novel genomic technologies - a review.
Vikender Kaur, Mamta Singh, Dhammaprakash Pandhari Wankhede, Kavita Gupta, Sapna Langyan, Shashank Kumar Yadav

Front Nutr· June 2023

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Rh(III)-Catalyzed C-H Annulation of Sulfoxonium Ylides and 1,3-Diynes: A Rapid Access to Alkynyl-1-Naphthol Derivatives.
Sanjeev Kumar, Vaishnavi Borkar, Saiprasad Nunewar, Shashank Yadav, Vinaykumar Kanchupalli

Chem Asian J· April 2023

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Hybrid Multitask Learning Reveals Sequence Features Driving Specificity in the CRISPR/Cas9 System.
Dhvani Sandip Vora, Shashank Yadav, Durai Sundar

Biomolecules· April 2023

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Integrated omics approaches for flax improvement under abiotic and biotic stress: Current status and future prospects.
Bindu Yadav, Vikender Kaur, Om Prakash Narayan, Shashank Kumar Yadav, Ashok Kumar

Front Plant Sci· July 2022

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Deep Neural Network-Assisted Drug Recommendation Systems for Identifying Potential Drug-Target Interactions.
Yogesh Kalakoti, Shashank Yadav, Durai Sundar

ACS Omega· April 2022

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TransDTI: Transformer-Based Language Models for Estimating DTIs and Building a Drug Recommendation Workflow.
Yogesh Kalakoti, Shashank Yadav, Durai Sundar

ACS Omega· January 2022

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SurvCNN: A Discrete Time-to-Event Cancer Survival Estimation Framework Using Image Representations of Omics Data.
Yogesh Kalakoti, Shashank Yadav, Durai Sundar

Cancers (Basel)· June 2021

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The abscisic acid receptor OsPYL6 confers drought tolerance to indica rice through dehydration avoidance and tolerance mechanisms.
V V Santosh Kumar, Shashank Kumar Yadav, Rakesh Kumar Verma, Sanya Shrivastava, Omprakash Ghimire

J Exp Bot· February 2021

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Overexpression of Arabidopsis enhances yield and multiple abiotic stress tolerance in indica rice.
Rakesh Kumar Verma, Vinjamuri Venkata Santosh Kumar, Shashank Kumar Yadav, Thiruppathi Senthil Kumar, Mandali Venkateswara Rao

Plant Signal Behav· November 2020

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Genome-wide identification and characterization of ABA receptor PYL gene family in rice.
Shashank Kumar Yadav, Vinjamuri Venkata Santosh Kumar, Rakesh Kumar Verma, Pragya Yadav, Ankit Saroha

BMC Genomics· September 2020

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CRISPR-Cas9 mediated genome editing of () gene in mega rice cultivar MTU1010.
V V Santosh Kumar, Rakesh Kumar Verma, Shashank Kumar Yadav, Pragya Yadav, Archana Watts

Physiol Mol Biol Plants· June 2020

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