Publications by authors named "Shaun R Cook"

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Genomic Characterization of From Beef Cattle Feedlots and Associated Environmental Continuum.
Sani-E-Zehra Zaidi, Rahat Zaheer, Ruth Barbieri, Shaun R Cook, Sherry J Hannon

Front Microbiol· June 2022

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Corrigendum: Multidrug Resistance in Associated With Bovine Respiratory Disease Mortalities in North America From 2011 to 2016.
Cassidy L Klima, Devin B Holman, Shaun R Cook, Cheyenne C Conrad, Brenda J Ralston

Front Microbiol· February 2021

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Multidrug Resistance in Associated With Bovine Respiratory Disease Mortalities in North America From 2011 to 2016.
Cassidy L Klima, Devin B Holman, Shaun R Cook, Cheyenne C Conrad, Brenda J Ralston

Front Microbiol· November 2020

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Author Correction: Surveillance of Enterococcus spp. reveals distinct species and antimicrobial resistance diversity across a One-Health continuum.
Rahat Zaheer, Shaun R Cook, Ruth Barbieri, Noriko Goji, Andrew Cameron

Sci Rep· August 2020

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A One Health Comparative Assessment of Antimicrobial Resistance in Generic and Extended-Spectrum Cephalosporin-Resistant from Beef Production, Sewage and Clinical Settings.
Emelia H Adator, Claudia Narvaez-Bravo, Rahat Zaheer, Shaun R Cook, Lisa Tymensen

Microorganisms· June 2020

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Presence and Diversity of Extended-Spectrum Cephalosporin Resistance Among from Urban Wastewater and Feedlot Cattle in Alberta, Canada.
Ashley C Cormier, Gabhan Chalmers, Shaun R Cook, Rahat Zaheer, Sherry J Hannon

Microb Drug Resist· March 2020

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Surveillance of Enterococcus spp. reveals distinct species and antimicrobial resistance diversity across a One-Health continuum.
Rahat Zaheer, Shaun R Cook, Ruth Barbieri, Noriko Goji, Andrew Cameron

Sci Rep· March 2020

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Whole Genome Sequencing Differentiates Presumptive Extended Spectrum Beta-Lactamase Producing along Segments of the One Health Continuum.
Emelia H Adator, Matthew Walker, Claudia Narvaez-Bravo, Rahat Zaheer, Noriko Goji, Shaun R Cook

Microorganisms· March 2020

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Plasmid Distribution among from Livestock and Associated Wastewater: Unraveling Factors That Shape the Presence of Genes Conferring Third-Generation Cephalosporin Resistance.
Lisa Tymensen, Calvin W Booker, Sherry J Hannon, Shaun R Cook, Cassandra C Jokinen

Environ Sci Technol· October 2019

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Characterization of the Microbial Resistome in Conventional and "Raised Without Antibiotics" Beef and Dairy Production Systems.
Pablo Rovira, Tim McAllister, Steven M Lakin, Shaun R Cook, Enrique Doster

Front Microbiol· September 2019

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Comparative diversity of microbiomes and Resistomes in beef feedlots, downstream environments and urban sewage influent.
Rahat Zaheer, Steven M Lakin, Rodrigo Ortega Polo, Shaun R Cook, Francis J Larney

BMC Microbiol· August 2019

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Clonal expansion of environmentally-adapted Escherichia coli contributes to propagation of antibiotic resistance genes in beef cattle feedlots.
Lisa Tymensen, Rahat Zaheer, Shaun R Cook, Kingsley K Amoako, Noriko Goji

Sci Total Environ· October 2018

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Effects of Condensed and Hydrolyzable Tannins on Rumen Metabolism with Emphasis on the Biohydrogenation of Unsaturated Fatty Acids.
Mónica Costa, Susana P Alves, Alice Cappucci, Shaun R Cook, Ana Duarte

J Agric Food Chem· April 2018

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Impact of sequencing depth on the characterization of the microbiome and resistome.
Rahat Zaheer, Noelle Noyes, Rodrigo Ortega Polo, Shaun R Cook, Eric Marinier

Sci Rep· April 2018

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In silico identification and high throughput screening of antigenic proteins as candidates for a Mannheimia haemolytica vaccine.
Cassidy L Klima, Rahat Zaheer, Shaun R Cook, Jay Rasmussen, Trevor W Alexander

Vet Immunol Immunopathol· January 2018

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Comparison of antimicrobial resistance genes in feedlots and urban wastewater.
Alicia G Beukers, Rahat Zaheer, Shaun R Cook, Alexandre V Chaves, Michael P Ward

Can J Vet Res· January 2018

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Environmental Growth of Enterococci and Escherichia coli in Feedlot Catch Basins and a Constructed Wetland in the Absence of Fecal Input.
Lisa Tymensen, Calvin W Booker, Sherry J Hannon, Shaun R Cook, Rahat Zaheer

Environ Sci Technol· May 2017

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Comparative Genomic Analysis of Mannheimia haemolytica from Bovine Sources.
Cassidy L Klima, Shaun R Cook, Rahat Zaheer, Chad Laing, Vick P Gannon

PLoS One· July 2016

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Draft Genome Sequence of an Enterococcus thailandicus Strain Isolated from Bovine Feces.
Alicia G Beukers, Rahat Zaheer, Noriko Goji, Shaun R Cook, Kingsley K Amoako

Genome Announc· July 2016

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Characterization of the resistome in manure, soil and wastewater from dairy and beef production systems.
Noelle R Noyes, Xiang Yang, Lyndsey M Linke, Roberta J Magnuson, Shaun R Cook

Sci Rep· April 2016

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Comparative analysis of multiple inducible phages from Mannheimia haemolytica.
Yan D Niu, Shaun R Cook, Jiaying Wang, Cassidy L Klima, Yu-hung Hsu

BMC Microbiol· August 2015

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Effect of in-feed administration and withdrawal of tylosin phosphate on antibiotic resistance in enterococci isolated from feedlot steers.
Alicia G Beukers, Rahat Zaheer, Shaun R Cook, Kim Stanford, Alexandre V Chaves

Front Microbiol· June 2015

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Pathogens of bovine respiratory disease in North American feedlots conferring multidrug resistance via integrative conjugative elements.
Cassidy L Klima, Rahat Zaheer, Shaun R Cook, Calvin W Booker, Steve Hendrick

J Clin Microbiol· February 2014

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Effect of subtherapeutic vs. therapeutic administration of macrolides on antimicrobial resistance in Mannheimia haemolytica and enterococci isolated from beef cattle.
Rahat Zaheer, Shaun R Cook, Cassidy L Klima, Kim Stanford, Trevor Alexander

Front Microbiol· June 2013

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Draft Genome Sequence of a Mannheimia haemolytica Serotype 6 Isolate Collected from the Nasopharynx of a Beef Calf with Bovine Respiratory Disease.
Cassidy L Klima, Shaun R Cook, Kristen R Hahn, Kingsley K Amoako, Trevor W Alexander

Genome Announc· April 2013

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