Publications by authors named "Shayoni Ray"

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NASA GeneLab RNA-seq consensus pipeline: standardized processing of short-read RNA-seq data.
Eliah G Overbey, Amanda M Saravia-Butler, Zhe Zhang, Komal S Rathi, Homer Fogle, Shayoni Ray

iScience· April 2021

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RNAseq Analysis of Rodent Spaceflight Experiments Is Confounded by Sample Collection Techniques.
San-Huei Lai Polo, Amanda M Saravia-Butler, Valery Boyko, Marie T Dinh, Yi-Chun Chen, Shayoni Ray

iScience· December 2020

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Hybrid Mouse Diversity Panel Identifies Genetic Architecture Associated with the Acute Antisense Oligonucleotide-Mediated Inflammatory Response to a 2'--Methoxyethyl Antisense Oligonucleotide.
Elaine Pirie, Patrick Cauntay, Wuxia Fu, Shayoni Ray, Calvin Pan, Padma Narayanan

Nucleic Acid Ther· October 2019

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GeneLab: Omics database for spaceflight experiments.
Shayoni Ray, Samrawit Gebre, Homer Fogle, Daniel C Berrios, Peter B Tran

Bioinformatics· May 2019

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A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response.
Afshin Beheshti, Shayoni Ray, Homer Fogle, Daniel Berrios, Sylvain V Costes

PLoS One· January 2019

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Mouse genome-wide association studies and systems genetics uncover the genetic architecture associated with hepatic pharmacokinetic and pharmacodynamic properties of a constrained ethyl antisense oligonucleotide targeting Malat1.
Elaine Pirie, Shayoni Ray, Calvin Pan, Wuxia Fu, Andrew F Powers

PLoS Genet· October 2018

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Comparing Photon and Charged Particle Therapy Using DNA Damage Biomarkers.
Shayoni Ray, Egle Cekanaviciute, Ivan Paulino Lima, Brita Singers Sørensen, Sylvain V Costes

Int J Part Ther· September 2018

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Prediction of Growth Factor-Dependent Cleft Formation During Branching Morphogenesis Using A Dynamic Graph-Based Growth Model.
Nimit Dhulekar, Shayoni Ray, Daniel Yuan, Abhirami Baskaran, Basak Oztan

IEEE/ACM Trans Comput Biol Bioinform· January 2017

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LIM kinase regulation of cytoskeletal dynamics is required for salivary gland branching morphogenesis.
Shayoni Ray, Joseph A Fanti, Diego P Macedo, Melinda Larsen

Mol Biol Cell· August 2014

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Cell-based multi-parametric model of cleft progression during submandibular salivary gland branching morphogenesis.
Shayoni Ray, Daniel Yuan, Nimit Dhulekar, Basak Oztan, Bülent Yener

PLoS Comput Biol· July 2014

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Genetic modification and recombination of salivary gland organ cultures.
Sharon J Sequeira, Elise M Gervais, Shayoni Ray, Melinda Larsen

J Vis Exp· January 2013

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Multiscale feature analysis of salivary gland branching morphogenesis.
Cemal Cagatay Bilgin, Shayoni Ray, Banu Baydil, William P Daley, Melinda Larsen

PLoS One· July 2012

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DNA binding ability and hydrogen peroxide induced nuclease activity of a novel Cu(II) complex with malonate as the primary ligand and protonated 2-amino-4-picoline as the counterion.
Biswarup Saha, Md Maidul Islam, Susmita Paul, Saheli Samanta, Shayoni Ray, Somnath Ray Choudhury

J Phys Chem B· May 2010

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