Publications by authors named "Shigeru Shimamura"

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Uncommon N-Glycan Structures in Anhydrobiotic Tardigrades.
Hirokazu Yagi, Taiki Saito, Shih-Yun Guu, Nao Yamakawa, Shigeru Shimamura

Mol Cell Proteomics· June 2025

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Exploring protein -glycosylation in ammonia-oxidizing archaea through glycoproteomic analysis.
Satoshi Nakagawa, Hirokazu Yagi, Tomoki Suyama, Shigeru Shimamura, Saeko Yanaka

mBio· June 2025

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TK2268 encodes the major aminotransferase involved in the conversion from oxaloacetic acid to aspartic acid in .
Yu Su, Yuta Michimori, Yuto Fukuyama, Shigeru Shimamura, Takuro Nunoura

Appl Environ Microbiol· March 2025

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Isolation and cultivation of a novel freshwater magnetotactic coccus FCR-1 containing unchained magnetosomes.
Hirokazu Shimoshige, Keiichi Yanagisawa, Masayuki Miyazaki, Yoshihiro Takaki, Shigeru Shimamura

Commun Biol· March 2025

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Genes for the Type-I Reaction Center and Galactolipid Synthesis are Required for Chlorophyll a Accumulation in a Purple Photosynthetic Bacterium.
Yusuke Tsukatani, Chihiro Azai, Tomoyasu Noji, Shigeru Kawai, Saori Sugimoto, Shigeru Shimamura

Plant Cell Physiol· February 2025

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-linked protein glycosylation in (formerly DPANN) archaea and their hosts.
Satoshi Nakagawa, Hiroyuki D Sakai, Shigeru Shimamura, Yoshiki Takamatsu, Shingo Kato

J Bacteriol· September 2024

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Correction: A single-molecule counting approach for convenient and ultrasensitive measurement of restriction digest efficiencies.
Yi Zhang, Takuro Nunoura, Daisuke Nishiura, Miho Hirai, Shigeru Shimamura

PLoS One· August 2024

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Characterization of protein glycosylation in an Asgard archaeon.
Satoshi Nakagawa, Hiroyuki Imachi, Shigeru Shimamura, Saeko Yanaka, Hirokazu Yagi

BBA Adv· July 2024

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Removal of phosphoglycolate in hyperthermophilic archaea.
Yuta Michimori, Rikihisa Izaki, Yu Su, Yuto Fukuyama, Shigeru Shimamura

Proc Natl Acad Sci U S A· April 2024

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Palaeoproteomic investigation of an ancient human skeleton with abnormal deposition of dental calculus.
Yoko Uchida-Fukuhara, Shigeru Shimamura, Rikai Sawafuji, Takumi Nishiuchi, Minoru Yoneda

Sci Rep· March 2024

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Development of a rapid and highly accurate method for C tracer-based metabolomics and its application on a hydrogenotrophic methanogen.
Yuto Fukuyama, Shigeru Shimamura, Sanae Sakai, Yuta Michimori, Tomomi Sumida

ISME Commun· January 2024

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Sequestration and efflux largely account for cadmium and copper resistance in the deep-sea Nitratiruptor sp. SB155-2 (phylum Campylobacterota).
Ángela Ares, Sanae Sakai, Toshio Sasaki, Shigeru Shimamura, Satoshi Mitarai

Environ Microbiol· December 2022

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Physiological and comparative proteomic characterization of gen. nov., sp. nov., a novel mesophilic, sulfur-disproportionating chemolithoautotroph from a deep-sea hydrothermal vent.
Yurina Hashimoto, Shigeru Shimamura, Akihiro Tame, Shigeki Sawayama, Junichi Miyazaki

Front Microbiol· December 2022

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sp. nov., a sulphate-reducing magnetotactic bacterium, isolated from sediments and freshwater of a pond.
Hirokazu Shimoshige, Hideki Kobayashi, Shigeru Shimamura, Masayuki Miyazaki, Toru Maekawa

Int J Syst Evol Microbiol· September 2022

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Proteomic Time-Course Analysis of the Filamentous Anoxygenic Phototrophic Bacterium, , during the Transition from Respiration to Phototrophy.
Shigeru Kawai, Shigeru Shimamura, Yasuhiro Shimane, Yusuke Tsukatani

Microorganisms· June 2022

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Isolation and cultivation of a novel sulfate-reducing magnetotactic bacterium belonging to the genus Desulfovibrio.
Hirokazu Shimoshige, Hideki Kobayashi, Shigeru Shimamura, Toru Mizuki, Akira Inoue

PLoS One· October 2021

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Chloroplast acquisition without the gene transfer in kleptoplastic sea slugs, .
Taro Maeda, Shunichi Takahashi, Takao Yoshida, Shigeru Shimamura, Yoshihiro Takaki

Elife· April 2021

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A single-molecule counting approach for convenient and ultrasensitive measurement of restriction digest efficiencies.
Yi Zhang, Takuro Nunoura, Daisuke Nishiura, Miho Hirai, Shigeru Shimamura

PLoS One· March 2021

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Discovery and analysis of a novel type of the serine biosynthetic enzyme phosphoserine phosphatase in Thermus thermophilus.
Yoko Chiba, Ayako Yoshida, Shigeru Shimamura, Masafumi Kameya, Takeo Tomita

FEBS J· February 2019

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Microbial Diversity in Sediments from the Bottom of the Challenger Deep, the Mariana Trench.
Takuro Nunoura, Manabu Nishizawa, Miho Hirai, Shigeru Shimamura, Phurt Harnvoravongchai

Microbes Environ· July 2018

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A primordial and reversible TCA cycle in a facultatively chemolithoautotrophic thermophile.
Takuro Nunoura, Yoshito Chikaraishi, Rikihisa Izaki, Takashi Suwa, Takaaki Sato, Shigeru Shimamura

Science· February 2018

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Ancient Occasional Host Switching of Maternally Transmitted Bacterial Symbionts of Chemosynthetic Vesicomyid Clams.
Genki Ozawa, Shigeru Shimamura, Yoshihiro Takaki, Kiyotaka Takishita, Tetsuro Ikuta

Genome Biol Evol· September 2017

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Formation of Core-Shell Nanoparticles Composed of Magnetite and Samarium Oxide in Magnetospirillum magneticum Strain RSS-1.
Hirokazu Shimoshige, Yoshikata Nakajima, Hideki Kobayashi, Keiichi Yanagisawa, Yutaka Nagaoka, Shigeru Shimamura

PLoS One· August 2017

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Loss of genes related to Nucleotide Excision Repair (NER) and implications for reductive genome evolution in symbionts of deep-sea vesicomyid clams.
Shigeru Shimamura, Takashi Kaneko, Genki Ozawa, Mamiko Nishino Matsumoto, Takeru Koshiishi

PLoS One· August 2017

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Correction: Loss of genes related to Nucleotide Excision Repair (NER) and implications for reductive genome evolution in symbionts of deep-sea vesicomyid clams.
Shigeru Shimamura, Takashi Kaneko, Genki Ozawa, Mamiko Nishino Matsumoto, Takeru Koshiishi

PLoS One· April 2017

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