Publications by authors named "Shirley Pomponi"

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Chemical richness and diversity of uncultivated 'Entotheonella' symbionts in marine sponges.
Maria Dell, Masato Kogawa, Alena B Streiff, Taro Shiraishi, Alessandro Lotti, Shirley Pomponi

Nat Chem Biol· November 2025

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The chromosomal genome sequence of the giant barrel sponge, Schmidt 1870 and its associated microbial metagenome sequences.
Jose Victor Lopez, Shirley A Pomponi, Ute Hentschel, Dirk Erpenbeck, Nina Pruzinsky

Wellcome Open Res· September 2025

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Novel use of a - 20°C cryoprotectant yields high viability and improved aggregation of marine sponge cells.
Elizabeth Urban-Gedamke, Megan Conkling, Cynthia Goodman, Xu Han, Shirley A Pomponi

In Vitro Cell Dev Biol Anim· May 2025

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Advancing marine invertebrate cell line research: four key knowledge gaps.
Baruch Rinkevich, Shirley A Pomponi

In Vitro Cell Dev Biol Anim· May 2025

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An in vitro cellular model for measuring the impact of thermal stress on Florida reef sponges.
Megan Conkling, Tobin Hindle, Zhixiao Xie, Weibo Liu, Timothy Moore, Shirley A Pomponi

In Vitro Cell Dev Biol Anim· May 2025

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Population genomics and connectivity of Vazella pourtalesii sponge grounds of the northwest Atlantic with conservation implications of deep sea vulnerable marine ecosystems.
Anna Patova, Pedro A Ribeiro, Francisco J Murillo, Ana Riesgo, Sergi Taboada, Shirley A Pomponi

Sci Rep· January 2025

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Short macrocyclic peptides in sponge genomes.
Zhenjian Lin, Vinayak Agarwal, Ying Cong, Shirley A Pomponi, Eric W Schmidt

Proc Natl Acad Sci U S A· March 2024

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Phylomitogenomics bolsters the high-level classification of Demospongiae (phylum Porifera).
Dennis V Lavrov, Maria C Diaz, Manuel Maldonado, Christine C Morrow, Thierry Perez, Shirley A Pomponi

PLoS One· December 2023

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An annotated and illustrated identification guide to common mesophotic reef sponges (Porifera, Demospongiae, Hexactinellida, and Homoscleromorpha) inhabiting Flower Garden Banks National Marine Sanctuary and vicinities.
Maria Cristina Díaz, Marissa Nuttall, Shirley A Pomponi, Klaus Rützler, Sarah Klontz

Zookeys· May 2023

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First continuous marine sponge cell line established.
Kylie Hesp, Jans M E van der Heijden, Stephanie Munroe, Detmer Sipkema, Dirk E Martens, Shirley A Pomponi

Sci Rep· April 2023

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High-Throughput Screening of a Marine Compound Library Identifies Anti- Activity of Leiodolide A.
Rachel M Bone Relat, Priscilla L Winder, Gregory D Bowden, Esther A Guzmán, Tara A Peterson, Shirley A Pomponi

Mar Drugs· March 2022

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3-D Culture of Marine Sponge Cells for Production of Bioactive Compounds.
Elizabeth Urban-Gedamke, Megan Conkling, Peter J McCarthy, Paul S Wills, Shirley A Pomponi

Mar Drugs· October 2021

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Systematics of 'lithistid' tetractinellid demosponges from the Tropical Western Atlantic-implications for phylodiversity and bathymetric distribution.
Astrid Schuster, Shirley A Pomponi, Andrzej Pisera, Paco Cárdenas, Michelle Kelly

PeerJ· April 2021

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Antiplasmodial Compounds from Deep-Water Marine Invertebrates.
Amy E Wright, Jennifer E Collins, Bracken Roberts, Jill C Roberts, Priscilla L Winder, Shirley A Pomponi

Mar Drugs· March 2021

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Mariana serpentinite mud volcanism exhumes subducted seamount materials: implications for the origin of life.
Patricia Fryer, C Geoffrey Wheat, Trevor Williams, Christopher Kelley, Kevin Johnson, Shirley Pomponi

Philos Trans A Math Phys Eng Sci· February 2020

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Plakinamine P, A Steroidal Alkaloid with Bactericidal Activity against .
Carolina Rodrigues Felix, Jill C Roberts, Priscilla L Winder, Rashmi Gupta, M Cristina Diaz, Shirley A Pomponi

Mar Drugs· December 2019

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Breakthrough in Marine Invertebrate Cell Culture: Sponge Cells Divide Rapidly in Improved Nutrient Medium.
Megan Conkling, Kylie Hesp, Stephanie Munroe, Kenneth Sandoval, Dirk E Martens, Shirley A Pomponi

Sci Rep· November 2019

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Diversity of tryptophan halogenases in sponges of the genus Aplysina.
Johanna Gutleben, Jasper J Koehorst, Kyle McPherson, Shirley Pomponi, René H Wijffels

FEMS Microbiol Ecol· August 2019

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Genetic algorithm as an optimization tool for the development of sponge cell culture media.
Stephanie Munroe, Kenneth Sandoval, Dirk E Martens, Detmer Sipkema, Shirley A Pomponi

In Vitro Cell Dev Biol Anim· March 2019

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pH Regulation and Tissue Coordination Pathways Promote Calcium Carbonate Bioerosion by Excavating Sponges.
Alice E Webb, Shirley A Pomponi, Fleur C van Duyl, Gert-Jan Reichart, Lennart J de Nooijer

Sci Rep· January 2019

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Mesophotic sponges of the genus Callyspongia (Demospongiae, Haplosclerida) from Cuba, with the description of two new species.
Linnet Busutil, MarÍa R GarcÍa-hernÁndez, M Cristina DÍaz, Shirley A Pomponi

Zootaxa· August 2018

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New Poecilosclerida from mesophotic coral reefs and the deep-sea escarpment in the Pulley Ridge region, eastern Gulf of Mexico: Discorhabdella ruetzleri n.sp. (Crambeidae) and Hymedesmia (Hymedesmia) vaceleti n.sp. (Hymedesmiidae).
M Cristina DÍaz, Shirley A Pomponi

Zootaxa· August 2018

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Divergence times in demosponges (Porifera): first insights from new mitogenomes and the inclusion of fossils in a birth-death clock model.
Astrid Schuster, Sergio Vargas, Ingrid S Knapp, Shirley A Pomponi, Robert J Toonen

BMC Evol Biol· July 2018

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How a collaborative integrated taxonomic effort has trained new spongiologists and improved knowledge of Martinique Island (French Antilles, eastern Caribbean Sea) marine biodiversity.
Thierry Pérez, Maria-Cristina Díaz, César Ruiz, Baslavi Cóndor-Luján, Michelle Klautau, Shirley A Pomponi

PLoS One· August 2017

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Selective Killing of Dormant Mycobacterium tuberculosis by Marine Natural Products.
Carolina Rodrigues Felix, Rashmi Gupta, Sandra Geden, Jill Roberts, Priscilla Winder, Shirley A Pomponi

Antimicrob Agents Chemother· August 2017

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