Publications by authors named "Simon Labarthe"

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Revealing microbial consortia that interfere with grapevine downy mildew through microbiome epidemiology.
Paola Fournier, Lucile Pellan, Aarti Jaswa, Marine C Cambon, Alexandre Chataigner, Simon Labarthe

Environ Microbiome· March 2025

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Revealing the dynamics and mechanisms of bacterial interactions in cheese production with metabolic modelling.
Maxime Lecomte, Wenfan Cao, Julie Aubert, David James Sherman, Hélène Falentin, Simon Labarthe

Metab Eng· May 2024

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Design of a proteolytic module for improved metabolic modeling of .
Amandine Paulay, Ghjuvan M Grimaud, Raphaël Caballero, Béatrice Laroche, Marion Leclerc, Simon Labarthe

mSystems· April 2024

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Community-scale models of microbiomes: Articulating metabolic modelling and metagenome sequencing.
Klara Cerk, Pablo Ugalde-Salas, Chabname Ghassemi Nedjad, Maxime Lecomte, Coralie Muller, Simon Labarthe

Microb Biotechnol· January 2024

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Migration of surface-associated microbial communities in spaceflight habitats.
Daniele Marra, Thodoris Karapantsios, Sergio Caserta, Eleonora Secchi, Malgorzata Holynska, Simon Labarthe

Biofilm· December 2023

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Four functional profiles for fibre and mucin metabolism in the human gut microbiome.
Simon Labarthe, Sandra Plancade, Sebastien Raguideau, Florian Plaza Oñate, Emmanuelle Le Chatelier

Microbiome· October 2023

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Inferring characteristics of bacterial swimming in biofilm matrix from time-lapse confocal laser scanning microscopy.
Guillaume Ravel, Michel Bergmann, Alain Trubuil, Julien Deschamps, Romain Briandet, Simon Labarthe

Elife· June 2022

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A PDMP model of the epithelial cell turn-over in the intestinal crypt including microbiota-derived regulations.
Léo Darrigade, Marie Haghebaert, Claire Cherbuy, Simon Labarthe, Beatrice Laroche

J Math Biol· June 2022

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Exploring the Bacterial Impact on Cholesterol Cycle: A Numerical Study.
Mélanie Bourgin, Simon Labarthe, Aicha Kriaa, Marie Lhomme, Philippe Gérard

Front Microbiol· June 2020

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A mathematical model to investigate the key drivers of the biogeography of the colon microbiota.
Simon Labarthe, Bastien Polizzi, Thuy Phan, Thierry Goudon, Magali Ribot

J Theor Biol· February 2019

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Spatial Organization Plasticity as an Adaptive Driver of Surface Microbial Communities.
Arnaud Bridier, Jean-Christophe Piard, Caroline Pandin, Simon Labarthe, Florence Dubois-Brissonnet

Front Microbiol· July 2017

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The Contribution of Intestinal Gluconeogenesis to Glucose Homeostasis Is Low in 2-Day-Old Pigs.
Claire Cherbuy, Pierre Vaugelade, Simon Labarthe, Edith Honvo-Houeto, Béatrice Darcy-Vrillon

J Nutr· March 2017

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Challenges in microbial ecology: building predictive understanding of community function and dynamics.
Stefanie Widder, Rosalind J Allen, Thomas Pfeiffer, Thomas P Curtis, Carsten Wiuf, Simon Labarthe

ISME J· November 2016

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A two layers monodomain model of cardiac electrophysiology of the atria.
Yves Coudière, Jacques Henry, Simon Labarthe

J Math Biol· December 2015

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A bilayer representation of the human atria.
Edward Vigmond, Simon Labarthe, Hubert Cochet, Yves Coudiere, Jacques Henry

Annu Int Conf IEEE Eng Med Biol Soc· August 2015

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A bilayer model of human atria: mathematical background, construction, and assessment.
Simon Labarthe, Jason Bayer, Yves Coudière, Jacques Henry, Hubert Cochet

Europace· November 2014

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