Publications by authors named "Simone Gardini"

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A patient-derived T cell lymphoma biorepository uncovers pathogenetic mechanisms and host-related therapeutic vulnerabilities.
Danilo Fiore, Luca Vincenzo Cappelli, Liu Zhaoqi, Nikita Kotlov, Maria Sorokina, Simone Gardini

Cell Rep Med· April 2025

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Gut microbiota functional profiling in autism spectrum disorders: bacterial VOCs and related metabolic pathways acting as disease biomarkers and predictors.
Pamela Vernocchi, Chiara Marangelo, Silvia Guerrera, Federica Del Chierico, Valerio Guarrasi, Simone Gardini

Front Microbiol· December 2023

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Williams-Beuren syndrome shapes the gut microbiota metaproteome.
Valeria Marzano, Stefano Levi Mortera, Pamela Vernocchi, Federica Del Chierico, Chiara Marangelo, Simone Gardini

Sci Rep· November 2023

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Functional and Taxonomic Traits of the Gut Microbiota in Type 1 Diabetes Children at the Onset: A Metaproteomic Study.
Stefano Levi Mortera, Valeria Marzano, Pamela Vernocchi, Maria Cristina Matteoli, Valerio Guarrasi, Simone Gardini

Int J Mol Sci· December 2022

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Gut Microbiota Functional Traits, Blood pH, and Anti-GAD Antibodies Concur in the Clinical Characterization of T1D at Onset.
Federica Del Chierico, Giorgia Conta, Maria Cristina Matteoli, Alessandra Fierabracci, Sofia Reddel, Simone Gardini

Int J Mol Sci· September 2022

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The Relationship Between Pediatric Gut Microbiota and SARS-CoV-2 Infection.
Lorenza Romani, Federica Del Chierico, Gabriele Macari, Stefania Pane, Maria Vittoria Ristori, Simone Gardini

Front Cell Infect Microbiol· July 2022

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Structural Bioinformatic Survey of Protein-Small Molecule Interfaces Delineates the Role of Glycine in Surface Pocket Formation.
Pietro Bongini, Neri Niccolai, Alfonso Trezza, Guido Mangiavacchi, Annalisa Santucci, Simone Gardini

IEEE/ACM Trans Comput Biol Bioinform· June 2022

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Gut Microbiota Ecology and Inferred Functions in Children With ASD Compared to Neurotypical Subjects.
Pamela Vernocchi, Maria Vittoria Ristori, Silvia Guerrera, Valerio Guarrasi, Federica Conte, Simone Gardini

Front Microbiol· June 2022

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A Shaving Proteomic Approach to Unveil Surface Proteins Modulation of Multi-Drug Resistant Strains Isolated From Cystic Fibrosis Patients.
Anna Lisa Montemari, Valeria Marzano, Nour Essa, Stefano Levi Mortera, Martina Rossitto, Simone Gardini

Front Med (Lausanne)· March 2022

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Cross-correlation of virome-bacteriome-host-metabolome to study respiratory health.
Andrea Iorio, Manuele Biazzo, Simone Gardini, Andrea Onetti Muda, Carlo Federico Perno

Trends Microbiol· January 2022

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A metaproteomic-based gut microbiota profiling in children affected by autism spectrum disorders.
Stefano Levi Mortera, Pamela Vernocchi, Ilaria Basadonne, Alessandro Zandonà, Marco Chierici, Simone Gardini

J Proteomics· January 2022

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Clinical Parasitology and Parasitome Maps as Old and New Tools to Improve Clinical Microbiomics.
Stefania Pane, Maria Vittoria Ristori, Simone Gardini, Alessandra Russo, Federica Del Chierico

Pathogens· November 2021

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Fecal microbiota signatures of insulin resistance, inflammation, and metabolic syndrome in youth with obesity: a pilot study.
Federica Del Chierico, Melania Manco, Simone Gardini, Valerio Guarrasi, Alessandra Russo

Acta Diabetol· August 2021

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Structural bioinformatics survey on disease-inducing missense mutations.
Pietro Bongini, Simone Gardini, Monica Bianchini, Ottavia Spiga, Neri Niccolai

J Bioinform Comput Biol· June 2021

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Gut Microbiota Profile in Children with IgE-Mediated Cow's Milk Allergy and Cow's Milk Sensitization and Probiotic Intestinal Persistence Evaluation.
Maurizio Mennini, Sofia Reddel, Federica Del Chierico, Simone Gardini, Andrea Quagliariello

Int J Mol Sci· February 2021

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Novel Compound Heterozygous Mutations in α Gene in a 15-Month-Old Girl Presenting With Thrombocytopenia, Normal T Cell Count and Maternal Engraftment.
Paola Zangari, Cristina Cifaldi, Silvia Di Cesare, Gigliola Di Matteo, Maria Chiriaco, Simone Gardini

Front Immunol· October 2020

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Proteomics and Metabolomics Approaches towards a Functional Insight onto AUTISM Spectrum Disorders: Phenotype Stratification and Biomarker Discovery.
Maria Vittoria Ristori, Stefano Levi Mortera, Valeria Marzano, Silvia Guerrera, Pamela Vernocchi, Simone Gardini

Int J Mol Sci· August 2020

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Structural investigation of Rett-inducing MeCP2 mutations.
Ottavia Spiga, Simone Gardini, Nicole Rossi, Vittoria Cicaloni, Francesco Pettini

Genes Dis· March 2019

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A structural bioinformatics investigation on protein-DNA complexes delineates their modes of interaction.
Simone Gardini, Simone Furini, Annalisa Santucci, Neri Niccolai

Mol Biosyst· May 2017

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Hot spot mapping of protein surfaces with TEMPOL: Bovine pancreatic RNase A as a model system.
Neri Niccolai, Edoardo Morandi, Simone Gardini, Valentino Costabile, Roberta Spadaccini

Biochim Biophys Acta Proteins Proteom· February 2017

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On Nature's Strategy for Assigning Genetic Code Multiplicity.
Simone Gardini, Sara Cheli, Silvia Baroni, Gabriele Di Lascio, Guido Mangiavacchi

PLoS One· July 2016

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