Publications by authors named "Simone Linz"

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Bounding the Softwired Parsimony Score of a Phylogenetic Network.
Janosch Döcker, Simone Linz, Kristina Wicke

Bull Math Biol· August 2024

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Exploring spaces of semi-directed level-1 networks.
Simone Linz, Kristina Wicke

J Math Biol· October 2023

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The rigid hybrid number for two phylogenetic trees.
Katharina T Huber, Simone Linz, Vincent Moulton

J Math Biol· March 2021

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Caterpillars on three and four leaves are sufficient to reconstruct binary normal networks.
Simone Linz, Charles Semple

J Math Biol· November 2020

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Autumn Algorithm-Computation of Hybridization Networks for Realistic Phylogenetic Trees.
Daniel H Huson, Simone Linz

IEEE/ACM Trans Comput Biol Bioinform· February 2019

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Lost in space? Generalising subtree prune and regraft to spaces of phylogenetic networks.
Magnus Bordewich, Simone Linz, Charles Semple

J Theor Biol· June 2017

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On the quirks of maximum parsimony and likelihood on phylogenetic networks.
Christopher Bryant, Mareike Fischer, Simone Linz, Charles Semple

J Theor Biol· March 2017

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Spaces of phylogenetic networks from generalized nearest-neighbor interchange operations.
Katharina T Huber, Simone Linz, Vincent Moulton, Taoyang Wu

J Math Biol· February 2016

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Phylogenetic networks that display a tree twice.
Paul Cordue, Simone Linz, Charles Semple

Bull Math Biol· October 2014

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The complexity of finding multiple solutions to betweenness and quartet compatibility.
Maria Luisa Bonet, Simone Linz, Katherine St John

IEEE/ACM Trans Comput Biol Bioinform· April 2014

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Cherry picking: a characterization of the temporal hybridization number for a set of phylogenies.
Peter J Humphries, Simone Linz, Charles Semple

Bull Math Biol· October 2013

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Identifying a species tree subject to random lateral gene transfer.
Mike Steel, Simone Linz, Daniel H Huson, Michael J Sanderson

J Theor Biol· April 2013

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A first step toward computing all hybridization networks for two rooted binary phylogenetic trees.
Celine Scornavacca, Simone Linz, Benjamin Albrecht

J Comput Biol· November 2012

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Quantifying hybridization in realistic time.
Joshua Collins, Simone Linz, Charles Semple

J Comput Biol· October 2011

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Analyzing and reconstructing reticulation networks under timing constraints.
Simone Linz, Charles Semple, Tanja Stadler

J Math Biol· November 2010

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On Hill et al's conjecture for calculating the subtree prune and regraft distance between phylogenies.
Simone Linz

BMC Evol Biol· October 2010

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Hybridization in nonbinary trees.
Simone Linz, Charles Semple

IEEE/ACM Trans Comput Biol Bioinform· August 2009

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A likelihood framework to measure horizontal gene transfer.
Simone Linz, Achim Radtke, Arndt von Haeseler

Mol Biol Evol· June 2007

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A reduction algorithm for computing the hybridization number of two trees.
Magnus Bordewich, Simone Linz, Katherine St John, Charles Semple

Evol Bioinform Online· May 2007

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PRODORIC: prokaryotic database of gene regulation.
Richard Münch, Karsten Hiller, Heiko Barg, Dana Heldt, Simone Linz

Nucleic Acids Res· January 2003

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