Publications by authors named "Simone Picelli"

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Adenoviral-based vaccine promotes neoantigen-specific CD8 T cell stemness and tumor rejection.
Anna Morena D'Alise, Nadia Brasu, Carlo De Intinis, Guido Leoni, Valentina Russo, Francesca Langone, Denis Baev, Elisa Micarelli, Luca Petiti, Simone Picelli

Sci Transl Med· August 2022

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High-efficiency base editing in the retina in primates and human tissues.
Alissa Muller, Jack Sullivan, Wibke Schwarzer, Mantian Wang, Cindy Park-Windhol, Simone Picelli

Nat Med· February 2025

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High-resolution multimodal profiling of human epileptic brain activity via explanted depth electrodes.
Anuj Kumar Dwivedi, Arun Mahesh, Albert Sanfeliu, Julian Larkin, Rebecca A Siwicki, Simone Picelli

JCI Insight· January 2025

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Multimodal spatiotemporal phenotyping of human retinal organoid development.
Philipp Wahle, Giovanna Brancati, Christoph Harmel, Zhisong He, Gabriele Gut, Simone Picelli

Nat Biotechnol· December 2023

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Pyramidal neurons form active, transient, multilayered circuits perturbed by autism-associated mutations at the inception of neocortex.
Martin Munz, Arjun Bharioke, Georg Kosche, Verónica Moreno-Juan, Alexandra Brignall, Simone Picelli

Cell· April 2023

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Full-Length Single-Cell RNA-Sequencing with FLASH-seq.
Vincent Hahaut, Simone Picelli

Methods Mol Biol· December 2022

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Fast and highly sensitive full-length single-cell RNA sequencing using FLASH-seq.
Vincent Hahaut, Dinko Pavlinic, Walter Carbone, Sven Schuierer, Pierre Balmer, Simone Picelli

Nat Biotechnol· October 2022

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Divergent clonal differentiation trajectories establish CD8 memory T cell heterogeneity during acute viral infections in humans.
Jeff E Mold, Laurent Modolo, Joanna Hård, Margherita Zamboni, Anton J M Larsson, Simone Picelli

Cell Rep· May 2021

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Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution.
Cameron S Cowan, Magdalena Renner, Martina De Gennaro, Brigitte Gross-Scherf, David Goldblum, Simone Picelli

Cell· September 2020

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BCG Vaccination in Humans Elicits Trained Immunity via the Hematopoietic Progenitor Compartment.
Branko Cirovic, L Charlotte J de Bree, Laszlo Groh, Bas A Blok, Joyce Chan, Simone Picelli

Cell Host Microbe· August 2020

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Single-Cell Transcriptomics Uncovers Zonation of Function in the Mesenchyme during Liver Fibrosis.
Ross Dobie, John R Wilson-Kanamori, Beth E P Henderson, James R Smith, Kylie P Matchett, Simone Picelli

Cell Rep· November 2019

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Full-Length Single-Cell RNA Sequencing with Smart-seq2.
Simone Picelli

Methods Mol Biol· August 2019

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Tutorial: guidelines for the experimental design of single-cell RNA sequencing studies.
Atefeh Lafzi, Catia Moutinho, Simone Picelli, Holger Heyn

Nat Protoc· December 2018

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Two novel colorectal cancer risk loci in the region on chromosome 9q22.32.
Jessada Thutkawkorapin, Hovsep Mahdessian, Tom Barber, Simone Picelli, Susanna von Holst

Oncotarget· February 2018

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STRT-seq-2i: dual-index 5' single cell and nucleus RNA-seq on an addressable microwell array.
Hannah Hochgerner, Peter Lönnerberg, Rebecca Hodge, Jaromir Mikes, Abeer Heskol, Simone Picelli

Sci Rep· November 2017

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- a novel candidate breast cancer susceptibility locus on 6q14.1.
Xiang Jiao, Christos Aravidis, Rajeshwari Marikkannu, Johanna Rantala, Simone Picelli

Oncotarget· November 2017

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Single-cell RNA-sequencing: The future of genome biology is now.
Simone Picelli

RNA Biol· May 2017

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Defining New Colorectal Cancer Syndromes in a Population-based Cohort of the Disease.
Anna Forsberg, Anne Keränen, Susanna VON Holst, Simone Picelli, Nikos Papadogiannakis

Anticancer Res· April 2017

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Single-Cell Transcriptome Profiling of Human Pancreatic Islets in Health and Type 2 Diabetes.
Åsa Segerstolpe, Athanasia Palasantza, Pernilla Eliasson, Eva-Marie Andersson, Anne-Christine Andréasson, Simone Picelli

Cell Metab· October 2016

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The heterogeneity of human CD127(+) innate lymphoid cells revealed by single-cell RNA sequencing.
Åsa K Björklund, Marianne Forkel, Simone Picelli, Viktoria Konya, Jakob Theorell

Nat Immunol· April 2016

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Exome sequencing in one family with gastric- and rectal cancer.
Jessada Thutkawkorapin, Simone Picelli, Vinaykumar Kontham, Tao Liu, Daniel Nilsson

BMC Genet· February 2016

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DNA methylome analysis in Burkitt and follicular lymphomas identifies differentially methylated regions linked to somatic mutation and transcriptional control.
Helene Kretzmer, Stephan H Bernhart, Wei Wang, Andrea Haake, Marc A Weniger, Simone Picelli

Nat Genet· November 2015

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Whole-genome Linkage Analysis and Sequence Analysis of Candidate Loci in Familial Breast Cancer.
Rajeshwari Marikkannu, Christos Aravidis, Johanna Rantala, Simone Picelli, Tatjana Adamovic

Anticancer Res· June 2015

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Tn5 transposase and tagmentation procedures for massively scaled sequencing projects.
Simone Picelli, Asa K Björklund, Björn Reinius, Sven Sagasser, Gösta Winberg

Genome Res· December 2014

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Decoding the regulatory landscape of medulloblastoma using DNA methylation sequencing.
Volker Hovestadt, David T W Jones, Simone Picelli, Wei Wang, Marcel Kool

Nature· June 2014

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