Publications by authors named "Sjoerd Stallinga"

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Detecting continuous structural heterogeneity in single molecule localization microscopy data with a point cloud variational auto-encoder.
Sobhan Haghparast, Yi Zhang, Qian Tao, Sjoerd Stallinga, Bernd Rieger

Sci Rep· December 2025

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Smart 3D super-resolution microscopy reveals the architecture of the RNA scaffold in a nuclear body.
Enya S Berrevoets, Laurell F Kessler, Ashwin Balakrishnan, Ellen Kazumi Okuda, Michaela Müller-McNicoll, Sjoerd Stallinga

Nat Commun· November 2025

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Multispectral live-cell imaging with uncompromised spatiotemporal resolution.
Akaash Kumar, Kerrie E McNally, Yuexuan Zhang, Alex Haslett-Saunders, Xinru Wang, Sjoerd Stallinga

Nat Photonics· September 2025

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Comparison of 3D structured illumination microscopy configurations in terms of spectral signal to noise ratio.
Valerii Brudanin, Bernd Rieger, Sjoerd Stallinga

Opt Express· March 2025

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Noise amplification and ill-convergence of Richardson-Lucy deconvolution.
Yiming Liu, Spozmai Panezai, Yutong Wang, Sjoerd Stallinga

Nat Commun· January 2025

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Calibration-free estimation of field dependent aberrations for single molecule localization microscopy across large fields of view.
Isabel Droste, Erik Schuitema, Sajjad Khan, Stijn Heldens, Ben van Werkhoven, Sjoerd Stallinga

bioRxiv· December 2024

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Single image Fourier ring correlation.
Bernd Rieger, Isabel Droste, Fabian Gerritsma, Tip Ten Brink, Sjoerd Stallinga

Opt Express· June 2024

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Detecting continuous structural heterogeneity in single-molecule localization microscopy data.
Sobhan Haghparast, Sjoerd Stallinga, Bernd Rieger

Sci Rep· November 2023

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Publisher Correction: Particle fusion of super-resolution data reveals the unit structure of Nup96 in Nuclear Pore Complex.
Wenxiu Wang, Arjen Jakobi, Yu-Le Wu, Jonas Ries, Sjoerd Stallinga

Sci Rep· September 2023

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Particle fusion of super-resolution data reveals the unit structure of Nup96 in Nuclear Pore Complex.
Wenxiu Wang, Arjen Jakobi, Yu-Le Wu, Jonas Ries, Sjoerd Stallinga

Sci Rep· August 2023

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Electron-beam patterned calibration structures for structured illumination microscopy.
Sangeetha Hari, Johan A Slotman, Yoram Vos, Christian Floris, Wiggert A van Cappellen, Sjoerd Stallinga

Sci Rep· November 2022

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Axial accuracy in localization microscopy with 3D point spread function engineering.
Marijn E Siemons, Lukas C Kapitein, Sjoerd Stallinga

Opt Express· August 2022

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Joint registration of multiple point clouds for fast particle fusion in localization microscopy.
Wenxiu Wang, Hamidreza Heydarian, Teun A P M Huijben, Sjoerd Stallinga, Bernd Rieger

Bioinformatics· June 2022

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Precision in iterative modulation enhanced single-molecule localization microscopy.
Dylan Kalisvaart, Jelmer Cnossen, Shih-Te Hung, Sjoerd Stallinga, Michel Verhaegen

Biophys J· June 2022

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Photon efficient orientation estimation using polarization modulation in single-molecule localization microscopy.
Rasmus Ø Thorsen, Christiaan N Hulleman, Bernd Rieger, Sjoerd Stallinga

Biomed Opt Express· May 2022

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Simultaneous orientation and 3D localization microscopy with a Vortex point spread function.
Christiaan N Hulleman, Rasmus Ø Thorsen, Eugene Kim, Cees Dekker, Sjoerd Stallinga

Nat Commun· October 2021

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Waveguide-based total internal reflection fluorescence microscope enabling cellular imaging under cryogenic conditions.
Qingru Li, Christiaan N Hulleman, Robert J Moerland, Elil Mailvaganam, Srividya Ganapathy, Sjoerd Stallinga

Opt Express· October 2021

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Structured illumination microscopy with noise-controlled image reconstructions.
Carlas S Smith, Johan A Slotman, Lothar Schermelleh, Nadya Chakrova, Sangeetha Hari, Sjoerd Stallinga

Nat Methods· July 2021

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Detecting structural heterogeneity in single-molecule localization microscopy data.
Teun A P M Huijben, Hamidreza Heydarian, Alexander Auer, Florian Schueder, Ralf Jungmann, Sjoerd Stallinga

Nat Commun· June 2021

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3D particle averaging and detection of macromolecular symmetry in localization microscopy.
Hamidreza Heydarian, Maarten Joosten, Adrian Przybylski, Florian Schueder, Ralf Jungmann, Sjoerd Stallinga

Nat Commun· May 2021

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Publisher Correction: 3D particle averaging and detection of macromolecular symmetry in localization microscopy.
Hamidreza Heydarian, Maarten Joosten, Adrian Przybylski, Florian Schueder, Ralf Jungmann, Sjoerd Stallinga

Nat Commun· May 2021

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High-speed multicolor structured illumination microscopy using a hexagonal single mode fiber array.
Taylor A Hinsdale, Sjoerd Stallinga, Bernd Rieger

Biomed Opt Express· February 2021

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Automated detection of cribriform growth patterns in prostate histology images.
Pierre Ambrosini, Eva Hollemans, Charlotte F Kweldam, Geert J L H van Leenders, Sjoerd Stallinga

Sci Rep· September 2020

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Image based aberration retrieval using helical point spread functions.
René Berlich, Sjoerd Stallinga

Appl Opt· August 2020

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Computational imaging modalities for multi-focal whole-slide imaging systems.
Leon van der Graaff, Geert J L H van Leenders, Fanny Boyaval, Sjoerd Stallinga

Appl Opt· July 2020

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