Publications by authors named "Smita P Pilla"

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Blind Prediction of Complex Water and Ion Ensembles Around RNA in CASP16.
Rachael C Kretsch, Elisa Posani, Eugene F Baulin, Janusz M Bujnicki, Giovanni Bussi, Smita P Pilla

Proteins· January 2026

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Blind prediction of complex water and ion ensembles around RNA in CASP16.
Rachael C Kretsch, Elisa Posani, Eugene F Baulin, Janusz M Bujnicki, Giovanni Bussi, Smita P Pilla

bioRxiv· November 2025

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When does molecular dynamics improve RNA models? Insights from CASP15 and practical guidelines.
Chandran Nithin, Smita P Pilla, Sebastian Kmiecik

Comput Struct Biotechnol J· October 2025

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RNA-Puzzles Round V: blind predictions of 23 RNA structures.
Fan Bu, Yagoub Adam, Ryszard W Adamiak, Maciej Antczak, Belisa Rebeca H de Aquino, Smita Priyadarshini Pilla

Nat Methods· February 2025

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Exploring protein functions from structural flexibility using CABS-flex modeling.
Chandran Nithin, Rocco Peter Fornari, Smita P Pilla, Karol Wroblewski, Mateusz Zalewski

Protein Sci· September 2024

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Are there double knots in proteins? Prediction and verification based on TrmD-Tm1570 fusion from .
Agata P Perlinska, Mai Lan Nguyen, Smita P Pilla, Emilia Staszor, Iwona Lewandowska

Front Mol Biosci· June 2024

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Residue conservation elucidates the evolution of r-proteins in ribosomal assembly and function.
Smita P Pilla, Ranjit Prasad Bahadur

Int J Biol Macromol· November 2019

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Dissecting protein-protein interactions in proteasome assembly: Implication to its self-assembly.
Smita P Pilla, Babu R, Ranjit P Bahadur

J Mol Recognit· September 2019

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Dissecting macromolecular recognition sites in ribosome: implication to its self-assembly.
Smita P Pilla, Amal Thomas, Ranjit Prasad Bahadur

RNA Biol· September 2019

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Molecular architecture of protein-RNA recognition sites.
Amita Barik, Nithin C, Smita P Pilla, Ranjit Prasad Bahadur

J Biomol Struct Dyn· October 2016

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