Publications by authors named "Sofia M Robb"

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Dynamic Retrieval Augmented Generation of Ontologies using Artificial Intelligence (DRAGON-AI).
Sabrina Toro, Anna V Anagnostopoulos, Susan M Bello, Kai Blumberg, Rhiannon Cameron, Sofia Mc Robb

J Biomed Semantics· October 2024

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The Unified Phenotype Ontology (uPheno): A framework for cross-species integrative phenomics.
Nicolas Matentzoglu, Susan M Bello, Ray Stefancsik, Sarah M Alghamdi, Anna V Anagnostopoulos, Sofia Mc Robb

bioRxiv· September 2024

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Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies.
Nicolas Matentzoglu, Damien Goutte-Gattat, Shawn Zheng Kai Tan, James P Balhoff, Seth Carbon, Sofia Mc Robb

Database (Oxford)· October 2022

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SmedGD 2.0: The Schmidtea mediterranea genome database.
Sofia M C Robb, Kirsten Gotting, Eric Ross, Alejandro Sánchez Alvarado

Genesis· August 2015

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Histone modifications and regeneration in the planarian Schmidtea mediterranea.
Sofia M C Robb, Alejandro Sánchez Alvarado

Curr Top Dev Biol· October 2014

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The use of RelocaTE and unassembled short reads to produce high-resolution snapshots of transposable element generated diversity in rice.
Sofia M C Robb, Lu Lu, Elizabeth Valencia, James M Burnette, Yutaka Okumoto

G3 (Bethesda)· June 2013

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SmedGD: the Schmidtea mediterranea genome database.
Sofia M C Robb, Eric Ross, Alejandro Sánchez Alvarado

Nucleic Acids Res· January 2008

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MAKER: an easy-to-use annotation pipeline designed for emerging model organism genomes.
Brandi L Cantarel, Ian Korf, Sofia M C Robb, Genis Parra, Eric Ross

Genome Res· January 2008

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The Schmidtea mediterranea database as a molecular resource for studying platyhelminthes, stem cells and regeneration.
Alejandro Sánchez Alvarado, Phillip A Newmark, Sofia M Robb, Réjeanne Juste

Development· December 2002

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Identification of immunological reagents for use in the study of freshwater planarians by means of whole-mount immunofluorescence and confocal microscopy.
Sofia M Robb, Alejandro Sánchez Alvarado

Genesis· April 2002

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