Publications by authors named "Stefani Thomas"

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Global Proteomic Determination of the Poly-Pharmacological Effects of PARP Inhibitors Following Treatment of High-Grade Serous Ovarian Cancer Cells.
Jesenia M Perez, Valerie Barrera-Estrada, Carly A I Twigg, Stefani N Thomas

Int J Mol Sci· December 2025

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Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer.
Hui Zhang, Tao Liu, Zhen Zhang, Samuel H Payne, Bai Zhang, Stefani Thomas

Cell· November 2025

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Global proteomic analysis of clinical strains reveals significant differences between latent and lethal infection.
Jovany J Betancourt, Jason A McAlister, Jesenia M Perez, David B Meya, Stefani N Thomas

mSystems· October 2025

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Global proteomic analysis of clinical strains reveals significant differences between latent and lethal infection.
Jovany J Betancourt, Jason A McAlister, Jesenia M Perez, David B Meya, Stefani N Thomas

bioRxiv· June 2025

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Proteomic Analysis of ARID1A-Deficient Ovarian Clear Cell Carcinoma Cells Reveals Differential Mitochondria ETC Subunit Abundances and Targetable Mitochondrial Pathways.
Jesenia M Perez, Joohyun Ryu, Hannah Khan, Mihir Shetty, Emma Parker, Stefani N Thomas

Int J Mol Sci· June 2025

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Cancer Incidence in the Hispanic Community Health Study/Study of Latinos (HCHS/SOL)-The Onco-SOL Ancillary Study.
Humberto Parada, Ilir Agalliu, Daniela Sotres-Alvarez, Andrew F Olshan, Kelly R Evenson, Thomas E Rohan, Stefani N Thomas

Cancer Epidemiol Biomarkers Prev· April 2025

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Investigating proteogenomic divergence in patient-derived xenograft models of ovarian cancer.
Jesenia M Perez, Jolene M Duda, Joohyun Ryu, Mihir Shetty, Subina Mehta, Stefani N Thomas

Sci Rep· January 2025

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Opportunities for predictive proteogenomic biomarkers of drug treatment sensitivity in epithelial ovarian cancer.
Trudy J Philips, Britt K Erickson, Stefani N Thomas

Front Oncol· January 2025

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Evaluation of Serum Proteome Sample Preparation Methods to Support Clinical Proteomics Applications.
Carly A I Twigg, Jesenia M Perez, Joohyun Ryu, Benjamin K Hanson, Valerie J Barrera Estrada, Stefani N Thomas

J Am Soc Mass Spectrom· November 2024

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Targeted electronic health record-based recruitment strategy to enhance COVID-19 vaccine response clinical research study enrollment.
Hninn Khine, Alex Mathson, Puleng R Moshele, Bharat Thyagarajan, Amy B Karger, Stefani N Thomas

Contemp Clin Trials Commun· February 2024

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Novel proteomic technologies to address gaps in pre-clinical ovarian cancer biomarker discovery efforts.
Helen A Jordan, Stefani N Thomas

Expert Rev Proteomics· January 2024

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Quantification of putative ovarian cancer serum protein biomarkers using a multiplexed targeted mass spectrometry assay.
Joohyun Ryu, Kristin L M Boylan, Carly A I Twigg, Richard Evans, Amy P N Skubitz, Stefani N Thomas

Clin Proteomics· January 2024

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Interactions of Histone Deacetylase 6 with DNA Damage Repair Factors Strengthen its Utility as a Combination Drug Target in High-Grade Serous Ovarian Cancer.
Jolene M Duda, Stefani N Thomas

ACS Pharmacol Transl Sci· December 2023

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Reply.
Stefani N Thomas, Heather M Stieglitz, Sarah Hackenmueller, Brenda Suh-Lailam, Amy L Pyle-Eilola

J Pediatr· April 2023

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Impact of VALID Act implementation on mass spectrometry-based clinical proteomic laboratory developed tests.
Yanchun Lin, Stefani N Thomas

J Mass Spectrom Adv Clin Lab· April 2023

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Greetings from the ASMS Publications Committee.
Stephen Valentine, Vanessa Phelan, Mowei Zhou, Stefani Thomas, Joe Cannon

J Am Soc Mass Spectrom· April 2023

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Differential histone deacetylase inhibitor-induced perturbations of the global proteome landscape in the setting of high-grade serous ovarian cancer.
Jolene M Duda, Carly A I Twigg, Stefani N Thomas

Proteomics· February 2023

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Liquid chromatography-tandem mass spectrometry for clinical diagnostics.
Stefani N Thomas, Deborah French, Paul J Jannetto, Brian A Rappold, William A Clarke

Nat Rev Methods Primers· December 2022

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Combination of Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC) and Substrate Trapping for the Detection of Transient Protein Interactions.
Jolene M Duda, Stefani N Thomas

Methods Mol Biol· November 2022

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Targeting lipid metabolism in the treatment of ovarian cancer.
Saliha Chaudhry, Stefani N Thomas, Glenn E Simmons

Oncotarget· September 2022

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The Serological Sciences Network (SeroNet) for COVID-19: Depth and Breadth of Serology Assays and Plans for Assay Harmonization.
Amy B Karger, James D Brien, Jayne M Christen, Santosh Dhakal, Troy J Kemp, Stefani N Thomas

mSphere· August 2022

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Use of Cotton Balls in Diapers for Collection of Urine Samples Impacts the Analysis of Routine Chemistry Tests: An Evaluation of Cotton Balls, Diapers, and Chemistry Analyzers.
Stefani N Thomas, Heather M Stieglitz, Sarah Hackenmueller, Brenda Suh-Lailam, Amy L Pyle-Eilola

J Pediatr· June 2022

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Mission, Organization, and Future Direction of the Serological Sciences Network for COVID-19 (SeroNet) Epidemiologic Cohort Studies.
Jane C Figueiredo, Fred R Hirsch, Lawrence H Kushi, Wendy N Nembhard, James M Crawford, Stefani N Thomas

Open Forum Infect Dis· June 2022

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Ultrasensitive detection of salivary SARS-CoV-2 IgG antibodies in individuals with natural and COVID-19 vaccine-induced immunity.
Stefani N Thomas, Amy B Karger, Ghaith Altawallbeh, Kathryn M Nelson, David R Jacobs

Sci Rep· May 2022

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The Serological Sciences Network (SeroNet) for COVID-19: Depth and Breadth of Serology Assays and Plans for Assay Harmonization.
Amy B Karger, James D Brien, Jayne M Christen, Santosh Dhakal, Troy J Kemp, Stefani N Thomas

medRxiv· March 2022

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