Publications by authors named "Stephen Anyango"

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R2DT: a comprehensive platform for visualizing RNA secondary structure.
Holly McCann, Caeden D Meade, Loren Dean Williams, Anton S Petrov, Philip Z Johnson, Stephen Anyango

Nucleic Acids Res· February 2025

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R2DT: A COMPREHENSIVE PLATFORM FOR VISUALISING RNA SECONDARY STRUCTURE.
Holly McCann, Caeden D Meade, Loren Dean Williams, Anton S Petrov, Philip Z Johnson, Stephen Anyango

bioRxiv· September 2024

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Cyanide and cyanidation wastes management in gold leaching plants in Siaya County, Kenya.
Beth Akinyi Ayoo, Stephen Obiero Anyango, Richard Mbithi Mulwa

Environ Geochem Health· August 2024

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Fine particulate matter air pollution and health implications for Nairobi, Kenya.
Otienoh Oguge, Joshua Nyamondo, Noah Adera, Lydia Okolla, Beldine Okoth, Stephen Anyango

Environ Epidemiol· June 2024

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Identifying protein conformational states in the Protein Data Bank: Toward unlocking the potential of integrative dynamics studies.
Joseph I J Ellaway, Stephen Anyango, Sreenath Nair, Hossam A Zaki, Nurul Nadzirin

Struct Dyn· May 2024

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Annotating Macromolecular Complexes in the Protein Data Bank: Improving the FAIRness of Structure Data.
Sri Devan Appasamy, John Berrisford, Romana Gaborova, Sreenath Nair, Stephen Anyango

Sci Data· December 2023

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PDBe CCDUtils: an RDKit-based toolkit for handling and analysing small molecules in the Protein Data Bank.
Ibrahim Roshan Kunnakkattu, Preeti Choudhary, Lukas Pravda, Nurul Nadzirin, Oliver S Smart, Stephen Anyango

J Cheminform· December 2023

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PDBImages: a command-line tool for automated macromolecular structure visualization.
Adam Midlik, Sreenath Nair, Stephen Anyango, Mandar Deshpande, David Sehnal

Bioinformatics· December 2023

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Unified access to up-to-date residue-level annotations from UniProtKB and other biological databases for PDB data.
Preeti Choudhary, Stephen Anyango, John Berrisford, James Tolchard, Mihaly Varadi

Sci Data· April 2023

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3D-Beacons: decreasing the gap between protein sequences and structures through a federated network of protein structure data resources.
Mihaly Varadi, Sreenath Nair, Ian Sillitoe, Gerardo Tauriello, Stephen Anyango

Gigascience· November 2022

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PDBe and PDBe-KB: Providing high-quality, up-to-date and integrated resources of macromolecular structures to support basic and applied research and education.
Mihaly Varadi, Stephen Anyango, Sri Devan Appasamy, David Armstrong, Marcus Bage

Protein Sci· October 2022

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AlphaFold Protein Structure Database: massively expanding the structural coverage of protein-sequence space with high-accuracy models.
Mihaly Varadi, Stephen Anyango, Mandar Deshpande, Sreenath Nair, Cindy Natassia

Nucleic Acids Res· January 2022

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PDBe aggregated API: programmatic access to an integrative knowledge graph of molecular structure data.
Sreenath Nair, Mihály Váradi, Nurul Nadzirin, Lukáš Pravda, Stephen Anyango

Bioinformatics· November 2021

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PDBeCIF: an open-source mmCIF/CIF parsing and processing package.
Glen van Ginkel, Lukáš Pravda, José M Dana, Mihaly Varadi, Peter Keller, Stephen Anyango

BMC Bioinformatics· July 2021

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PDBe: improved findability of macromolecular structure data in the PDB.
David R Armstrong, John M Berrisford, Matthew J Conroy, Aleksandras Gutmanas, Stephen Anyango

Nucleic Acids Res· January 2020

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PDBe: towards reusable data delivery infrastructure at protein data bank in Europe.
Saqib Mir, Younes Alhroub, Stephen Anyango, David R Armstrong, John M Berrisford

Nucleic Acids Res· January 2018

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