Publications by authors named "Stephen Farr"

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Correction to "ROSHAMBO2: Accelerating Molecular Alignment for Large Chemical Libraries with GPU Optimization and Algorithmic Advances".
Rasha Atwi, Stephen Farr, Ye Wang, Adam Antoszewski, Simone Sciabola

J Chem Inf Model· January 2026

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ROSHAMBO2: Accelerating Molecular Alignment for Large Chemical Libraries with GPU Optimization and Algorithmic Advances.
Rasha Atwi, Stephen Farr, Ye Wang, Adam Antoszewski, Simone Sciabola

J Chem Inf Model· October 2025

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Nucleosome spacing can fine-tune higher-order chromatin assembly.
Lifeng Chen, M Julia Maristany, Stephen E Farr, Jinyue Luo, Bryan A Gibson

Nat Commun· July 2025

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QuantumBind-RBFE: Accurate Relative Binding Free Energy Calculations Using Neural Network Potentials.
Francesc Sabanés Zariquiey, Stephen E Farr, Stefan Doerr, Gianni De Fabritiis

J Chem Inf Model· April 2025

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Nucleosome Spacing Can Fine-Tune Higher Order Chromatin Assembly.
Lifeng Chen, M Julia Maristany, Stephen E Farr, Jinyue Luo, Bryan A Gibson

bioRxiv· December 2024

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OpenMM 8: Molecular Dynamics Simulation with Machine Learning Potentials.
Peter Eastman, Raimondas Galvelis, Raúl P Peláez, Charlles R A Abreu, Stephen E Farr

J Phys Chem B· January 2024

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OpenMM 8: Molecular Dynamics Simulation with Machine Learning Potentials.
Peter Eastman, Raimondas Galvelis, Raúl P Peláez, Charlles R A Abreu, Stephen E Farr

ArXiv· November 2023

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Nucleosome plasticity is a critical element of chromatin liquid-liquid phase separation and multivalent nucleosome interactions.
Stephen E Farr, Esmae J Woods, Jerelle A Joseph, Adiran Garaizar, Rosana Collepardo-Guevara

Nat Commun· May 2021

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DNA binds to a specific site of the adhesive blood-protein von Willebrand factor guided by electrostatic interactions.
Angélica Sandoval-Pérez, Ricarda M L Berger, Adiran Garaizar, Stephen E Farr, Maria A Brehm

Nucleic Acids Res· November 2020

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DNA binds to a specific site of the adhesive blood-protein von Willebrand factor guided by electrostatic interactions.
Angélica Sandoval-Pérez, Ricarda M L Berger, Adiran Garaizar, Stephen E Farr, Maria A Brehm

Nucleic Acids Res· July 2020

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Emergence of chromatin hierarchical loops from protein disorder and nucleosome asymmetry.
Akshay Sridhar, Stephen E Farr, Guillem Portella, Tamar Schlick, Modesto Orozco

Proc Natl Acad Sci U S A· March 2020

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A pharmacokinetic evaluation of single and multiple doses of extended-release hydrocodone bitartrate in subjects experiencing surgical or osteoarthritic pain.
Cynthia Y Robinson, Christopher M Rubino, Stephen J Farr

J Opioid Manag· February 2016

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Effects of food and alcohol on the pharmacokinetics of an oral, extended-release formulation of hydrocodone in healthy volunteers.
Stephen J Farr, Cynthia Y Robinson, Christopher M Rubino

Clin Pharmacol· February 2015

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A long-term, open-label safety study of single-entity hydrocodone bitartrate extended release for the treatment of moderate to severe chronic pain.
Srinivas Nalamachu, Richard L Rauck, Martin E Hale, Orlando G Florete, Cynthia Y Robinson, Stephen J Farr

J Pain Res· December 2014

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Single-entity hydrocodone extended-release capsules in opioid-tolerant subjects with moderate-to-severe chronic low back pain: a randomized double-blind, placebo-controlled study.
Richard L Rauck, Srinivas Nalamachu, James E Wild, George S Walker, Cynthia Y Robinson, Stephen J Farr

Pain Med· June 2014

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Population pharmacokinetic analysis for hydrocodone following the administration of hydrocodone bitartrate extended-release capsules.
Murad R Melhem, Christopher M Rubino, Stephen J Farr, Cynthia Y Robinson

Clin Pharmacokinet· October 2013

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A review of needle-free sumatriptan injection for rapid control of migraine.
John F Rothrock, Frederick G Freitag, Stephen J Farr, Edward F Smith

Headache· September 2013

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Clarification on hydrocodone (zohydro).
Stephen J Farr

P T· September 2012

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Needle-free subcutaneous sumatriptan for triptan users requiring a change in migraine therapy: efficacy and impact on patient-rated functionality, satisfaction, and confidence.
John F Rothrock, Roger K Cady, Sheena K Aurora, Jan Lewis Brandes, Judith A Myers, Stephen J Farr

Curr Med Res Opin· November 2011

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Satisfaction with and confidence in needle-free subcutaneous sumatriptan in patients currently treated with triptans.
Roger K Cady, Sheena K Aurora, Jan L Brandes, John F Rothrock, Judith A Myers, Stephen J Farr

Headache· September 2011

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Needle-free subcutaneous sumatriptan (Sumavel DosePro): bioequivalence and ease of use.
Jan Lewis Brandes, Roger K Cady, Fred G Freitag, Timothy R Smith, Patricia Chandler, Stephen J Farr

Headache· August 2011

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The effects of system parameters on in vivo injection performance of a needle-free injector in human volunteers.
Lawrence Linn, Brooks Boyd, Hristo Iontchev, Toby King, Stephen J Farr

Pharm Res· August 2007

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Pulmonary delivery of opioids as pain therapeutics.
Stephen J Farr, Babatunde A Otulana

Adv Drug Deliv Rev· October 2006

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Gamma scintigraphic evaluation of a miniaturized AERx pulmonary delivery system for aerosol delivery to anesthetized animals using a positive pressure ventilation system.
Deepa S Deshpande, James D Blanchard, Jeffrey Schuster, Dallas Fairbanks, Charles Hobbs, Stephen Farr

J Aerosol Med· May 2005

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Effect of gender and device mouthpiece shape on bolus insulin aerosol delivery using the AERx pulmonary delivery system.
Brooks Boyd, Peter Noymer, Kui Liu, Jerry Okikawa, Dave Hasegawa, Stephen Farr

Pharm Res· October 2004

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