Publications by authors named "Stephen J Kiniry"

Claim this Profile
R
RiboSeq.Org: an integrated suite of resources for ribosome profiling data analysis and visualization.
Jack A S Tierney, Michał I Świrski, Håkon Tjeldnes, Anmol M Kiran, Gionmattia Carancini, Stephen J Kiniry

Nucleic Acids Res· January 2025

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Impact of eIF2α phosphorylation on the translational landscape of mouse embryonic stem cells.
Mehdi Amiri, Stephen J Kiniry, Anthony P Possemato, Niaz Mahmood, Tayebeh Basiri

Cell Rep· January 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
Addendum: Thousands of human non-AUG extended proteoforms lack evidence of evolutionary selection among mammals.
Alla D Fedorova, Stephen J Kiniry, Dmitry E Andreev, Jonathan M Mudge, Pavel V Baranov

Nat Commun· January 2024

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
Thousands of human non-AUG extended proteoforms lack evidence of evolutionary selection among mammals.
Alla D Fedorova, Stephen J Kiniry, Dmitry E Andreev, Jonathan M Mudge, Pavel V Baranov

Nat Commun· December 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
D
Development of a ribosome profiling protocol to study translation in Kluyveromyces marxianus.
Darren A Fenton, Stephen J Kiniry, Martina M Yordanova, Pavel V Baranov, John P Morrissey

FEMS Yeast Res· June 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
E
Evaluating ribosomal frameshifting in CCR5 mRNA decoding.
Yousuf A Khan, Gary Loughran, Anna-Lena Steckelberg, Katherine Brown, Stephen J Kiniry

Nature· April 2022

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
E
Exploring Evidence of Non-coding RNA Translation With Trips-Viz and GWIPS-Viz Browsers.
Oza Zaheed, Stephen J Kiniry, Pavel V Baranov, Kellie Dean

Front Cell Dev Biol· August 2021

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
Trips-Viz: an environment for the analysis of public and user-generated ribosome profiling data.
Stephen J Kiniry, Ciara E Judge, Audrey M Michel, Pavel V Baranov

Nucleic Acids Res· July 2021

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
U
Unusually efficient CUG initiation of an overlapping reading frame in mRNA yields novel protein POLGARF.
Gary Loughran, Alexander V Zhdanov, Maria S Mikhaylova, Fedor N Rozov, Petr N Datskevich, Stephen J Kiniry

Proc Natl Acad Sci U S A· October 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
E
eIF2α controls memory consolidation via excitatory and somatostatin neurons.
Vijendra Sharma, Rapita Sood, Abdessattar Khlaifia, Mohammad Javad Eslamizade, Tzu-Yu Hung, Stephen J Kiniry

Nature· October 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
S
Selection Shapes Synonymous Stop Codon Use in Mammals.
Cathal Seoighe, Stephen J Kiniry, Andrew Peters, Pavel V Baranov, Haixuan Yang

J Mol Evol· September 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
I
Identification and characterization of hippuristanol-resistant mutants reveals eIF4A1 dependencies within mRNA 5' leader regions.
Jutta Steinberger, Leo Shen, Stephen J Kiniry, Sai Kiran Naineni, Regina Cencic

Nucleic Acids Res· September 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
Computational methods for ribosome profiling data analysis.
Stephen J Kiniry, Audrey M Michel, Pavel V Baranov

Wiley Interdiscip Rev RNA· May 2020

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
C
Cellular Gene Expression during Hepatitis C Virus Replication as Revealed by Ribosome Profiling.
Gesche K Gerresheim, Jochen Bathke, Audrey M Michel, Dmitri E Andreev, Lyudmila A Shalamova, Stephen J Kiniry

Int J Mol Sci· March 2019

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
Trips-Viz: a transcriptome browser for exploring Ribo-Seq data.
Stephen J Kiniry, Patrick B F O'Connor, Audrey M Michel, Pavel V Baranov

Nucleic Acids Res· January 2019

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
The GWIPS-viz Browser.
Stephen J Kiniry, Audrey M Michel, Pavel V Baranov

Curr Protoc Bioinformatics· June 2018

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
T
TASEP modelling provides a parsimonious explanation for the ability of a single uORF to derepress translation during the integrated stress response.
Dmitry E Andreev, Maxim Arnold, Stephen J Kiniry, Gary Loughran, Audrey M Michel

Elife· June 2018

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
G
GWIPS-viz: 2018 update.
Audrey M Michel, Stephen J Kiniry, Patrick B F O'Connor, James P Mullan, Pavel V Baranov

Nucleic Acids Res· January 2018

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis
A
AMD1 mRNA employs ribosome stalling as a mechanism for molecular memory formation.
Martina M Yordanova, Gary Loughran, Alexander V Zhdanov, Marco Mariotti, Stephen J Kiniry

Nature· January 2018

Social Media Activity not collected for this article yet.

Sign Up to Request Social Media Analysis