Publications by authors named "Stephen Oliver"

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B cell depletion and BAFF receptor blockade with ianalumab (VAY736) for the treatment of moderate-to-severe systemic lupus erythematosus: a phase 2 randomised, double-blind, placebo-controlled trial with subsequent open-label treatment.
Nancy Agmon-Levin, Stanislav Ignatenko, Alexander Gordienko, Josefina Cortés-Hernández, Pongthorn Narongroeknawin, Stephen John Oliver

Ann Rheum Dis· December 2025

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Enhancing genome-scale metabolic models with kinetic data: resolving growth and citramalate production trade-offs in .
Jorge Lázaro, Arin Wongprommoon, Jorge Júlvez, Stephen G Oliver

Bioinform Adv· July 2025

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Inferring gene regulatory networks of ALS from blood transcriptome profiles.
Xena G Pappalardo, Giorgio Jansen, Matteo Amaradio, Jole Costanza, Renato Umeton, Stephen G Oliver

Heliyon· December 2024

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Minimisation of metabolic networks defines a new functional class of genes.
Giorgio Jansen, Tanda Qi, Vito Latora, Grigoris D Amoutzias, Daniela Delneri, Stephen G Oliver

Nat Commun· October 2024

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pyPGCF: A Python Software for Phylogenomic Analysis, Species Demarcation, Identification of Core, and Fingerprint Proteins of Bacterial Genomes That Are Important for Plants.
Marios Nikolaidis, Stephen G Oliver, Grigorios D Amoutzias

Methods Mol Biol· April 2024

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Synthetic yeast chromosome XI design provides a testbed for the study of extrachromosomal circular DNA dynamics.
Benjamin A Blount, Xinyu Lu, Maureen R M Driessen, Dejana Jovicevic, Mateo I Sanchez, Glen-Oliver F Gowers, Stephen G Oliver

Cell Genom· November 2023

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A panoramic view of the genomic landscape of the genus .
Marios Nikolaidis, Andrew Hesketh, Nikoletta Frangou, Dimitris Mossialos, Yves Van de Peer, Stephen G Oliver

Microb Genom· June 2023

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A Comparative Analysis of the Core Proteomes within and among the and Evolutionary Groups Reveals the Patterns of Lineage- and Species-Specific Adaptations.
Marios Nikolaidis, Andrew Hesketh, Dimitris Mossialos, Ioannis Iliopoulos, Stephen G Oliver

Microorganisms· August 2022

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The future of yeast research.
Stephen G Oliver

Microbiology (Reading)· July 2022

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Fission stories: using PomBase to understand Schizosaccharomyces pombe biology.
Midori A Harris, Kim M Rutherford, Jacqueline Hayles, Antonia Lock, Jürg Bähler, Stephen G Oliver

Genetics· April 2022

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A randomized, placebo-controlled, double-blind trial of canakinumab in children and young adults with sickle cell anemia.
David C Rees, Yurdanur Kilinc, Selma Unal, Carlton Dampier, Betty S Pace, Stephen J Oliver

Blood· April 2022

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Combination of Genome-Scale Models and Bioreactor Dynamics to Optimize the Production of Commodity Chemicals.
Jorge Lázaro, Giorgio Jansen, Yiheng Yang, Mario A Torres-Acosta, Gary Lye, Stephen G Oliver

Front Mol Biosci· April 2022

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Comparative Analysis of SARS-CoV-2 Variants of Concern, Including Omicron, Highlights Their Common and Distinctive Amino Acid Substitution Patterns, Especially at the Spike ORF.
Marios Nikolaidis, Athanasios Papakyriakou, Katerina Chlichlia, Panayotis Markoulatos, Stephen G Oliver

Viruses· March 2022

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From Petri Plates to Petri Nets, a revolution in yeast biology.
Stephen G Oliver

FEMS Yeast Res· February 2022

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The Neighborhood of the Spike Gene Is a Hotspot for Modular Intertypic Homologous and Nonhomologous Recombination in Coronavirus Genomes.
Marios Nikolaidis, Panayotis Markoulatos, Yves Van de Peer, Stephen G Oliver, Grigorios D Amoutzias

Mol Biol Evol· January 2022

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The Remarkable Evolutionary Plasticity of Coronaviruses by Mutation and Recombination: Insights for the COVID-19 Pandemic and the Future Evolutionary Paths of SARS-CoV-2.
Grigorios D Amoutzias, Marios Nikolaidis, Eleni Tryfonopoulou, Katerina Chlichlia, Panayotis Markoulatos, Stephen G Oliver

Viruses· January 2022

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Yeast Double Transporter Gene Deletion Library for Identification of Xenobiotic Carriers in Low or High Throughput.
Ludimila Dias Almeida, Ali Salim Faraj Silva, Daniel Calixto Mota, Adrielle Ayumi Vasconcelos, Antônio Pedro Camargo, Stephen G Oliver

mBio· December 2021

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Ianalumab (VAY736) in primary Sjögren's syndrome: assessing disease activity using multi-modal ultrasound.
Torsten Diekhoff, Thomas Fischer, Quirino Schefer, Maximilian Georg Posch, Thomas Dörner, Stephen John Oliver

Clin Exp Rheumatol· October 2020

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A unifying modelling formalism for the integration of stoichiometric and kinetic models.
Jorge Júlvez, Stephen G Oliver

J R Soc Interface· August 2020

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Yeast Systems Biology: The Continuing Challenge of Eukaryotic Complexity.
Stephen G Oliver

Methods Mol Biol· June 2020

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Mapping the Saccharomyces cerevisiae Spatial Proteome with High Resolution Using hyperLOPIT.
Daniel J H Nightingale, Stephen G Oliver, Kathryn S Lilley

Methods Mol Biol· June 2020

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The NLRP3 inflammasome pathway is activated in sarcoidosis and involved in granuloma formation.
Christine Huppertz, Benedikt Jäger, Grazyna Wieczorek, Peggy Engelhard, Stephen J Oliver

Eur Respir J· March 2020

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Dairy producers in the Southeast United States are concerned with cow care and welfare.
Amanda Lee, Susan Schexnayder, Liesel Schneider, Stephen Oliver, Gina Pighetti

J Dairy Res· February 2020

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Low complexity regions in the proteins of prokaryotes perform important functional roles and are highly conserved.
Chrysa Ntountoumi, Panayotis Vlastaridis, Dimitris Mossialos, Constantinos Stathopoulos, Ioannis Iliopoulos, Stephen G Oliver

Nucleic Acids Res· November 2019

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Metabolic response to Parkinson's disease recapitulated by the haploinsufficient diploid yeast cells hemizygous for the adrenodoxin reductase gene.
Duygu Dikicioglu, James W M T Coxon, Stephen G Oliver

Mol Omics· October 2019

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