Publications by authors named "Steven Andrews"

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Discovering subnetworks in SBML models.
Joseph L Hellerstein, Lucian P Smith, Lillian T Tatka, Steven S Andrews, Michael A Kochen

Bioinformatics· September 2025

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Pilot Trial of Nutri, a Digital Intervention for Personalized Dietary Management of Diabetes in Safety-Net Primary Care.
Marissa Burgermaster, Madalyn Rosenthal, Brandon S Altillo, Mariana Rendon Flores, Eesha Nayak, Steven Andrews

J Nutr Educ Behav· July 2025

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The turbulent soundscape of intertidal oyster reefs.
Martin P Volaric, Eli M Stine, Matthew Burtner, Steven S Andrews, Peter Berg

PLoS One· May 2025

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Individual yeast cells signal at different levels but each with good precision.
Steven S Andrews, Roger Brent

R Soc Open Sci· April 2025

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Modeling Diffusion Between Regions with Different Diffusion Coefficients.
Steven S Andrews

IEEE Trans Mol Biol Multiscale Commun· September 2024

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The turbulent soundscape of intertidal oyster reefs.
Martin P Volaric, Eli M Stine, Matthew Burtner, Steven S Andrews, Peter Berg

bioRxiv· August 2024

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Signal integration and integral feedback control with biochemical reaction networks.
Steven S Andrews, Michael Kochen, Lucian Smith, Song Feng, H Steven Wiley

bioRxiv· April 2024

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Design Patterns of Biological Cells.
Steven S Andrews, H Steven Wiley, Herbert M Sauro

ArXiv· October 2023

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Nutri: A Behavioral Science-Based Clinical Decision Support for Chronic Disease Management.
Marissa Burgermaster, Madalyn Rosenthal, William M Tierney, Brandon S Altillo, Eric Nordquist, Steven Andrews

AMIA Annu Symp Proc· May 2023

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Range-wide sources of variation in reproductive rates of northern spotted owls.
Jeremy T Rockweit, Julianna M Jenkins, James E Hines, James D Nichols, Katie M Dugger, L Steven Andrews

Ecol Appl· January 2023

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Landscape of MicroRNA Regulatory Network Architecture and Functional Rerouting in Cancer.
Xu Hua, Yongsheng Li, Sairahul R Pentaparthi, Daniel J McGrail, Raymond Zou, Steven Andrews

Cancer Res· January 2023

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BioSimulators: a central registry of simulation engines and services for recommending specific tools.
Bilal Shaikh, Lucian P Smith, Dan Vasilescu, Gnaneswara Marupilla, Michael Wilson, Steven S Andrews

Nucleic Acids Res· July 2022

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Dynamics and Sensitivity of Signaling Pathways.
Michael A Kochen, Steven S Andrews, H Steven Wiley, Song Feng, Herbert M Sauro

Curr Pathobiol Rep· June 2022

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Python interfaces for the Smoldyn simulator.
Dilawar Singh, Steven S Andrews

Bioinformatics· December 2021

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Conspecific and congeneric interactions shape increasing rates of breeding dispersal of northern spotted owls.
Julianna M A Jenkins, Damon B Lesmeister, Eric D Forsman, Katie M Dugger, Steven H Ackers, L Steven Andrews

Ecol Appl· October 2021

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Using Blockchain Technology to Mitigate Challenges in Service Access for the Homeless and Data Exchange Between Providers: Qualitative Study.
Anjum Khurshid, Vivian Rajeswaren, Steven Andrews

J Med Internet Res· June 2020

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Effects of surfaces and macromolecular crowding on bimolecular reaction rates.
Steven S Andrews

Phys Biol· May 2020

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Developing a real-time EHR-integrated SDoH clinical tool.
Anjum Khurshid, Eliel Oliveira, Autumn Kaerwer, Daniel Harrell, Richard Peters, Steven B Andrews

AMIA Jt Summits Transl Sci Proc· May 2020

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Rule-Based Modeling Using Wildcards in the Smoldyn Simulator.
Steven S Andrews

Methods Mol Biol· July 2019

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Transferring information without distortion.
Steven S Andrews, Roger Brent, Gábor Balázsi

Elife· October 2018

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Smoldyn: particle-based simulation with rule-based modeling, improved molecular interaction and a library interface.
Steven S Andrews

Bioinformatics· March 2017

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Push-Pull and Feedback Mechanisms Can Align Signaling System Outputs with Inputs.
Steven S Andrews, William J Peria, Richard C Yu, Alejandro Colman-Lerner, Roger Brent

Cell Syst· November 2016

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Selective inhibition of tropomyosin-receptor-kinase A (TrkA) reduces pain and joint damage in two rat models of inflammatory arthritis.
Sadaf Ashraf, Karyn S Bouhana, Jed Pheneger, Steven W Andrews, David A Walsh

Arthritis Res Ther· May 2016

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Crosstalk between the lipopolysaccharide and phospholipid pathways during outer membrane biogenesis in Escherichia coli.
Akintunde Emiola, Steven S Andrews, Carolin Heller, John George

Proc Natl Acad Sci U S A· March 2016

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