Publications by authors named "Stuart C Clarke"

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The Road Less Traveled: Exploring the Genomic Characteristics and Antimicrobial Resistance Potential of Acinetobacter baumannii From the Indigenous Orang Asli Community in Peninsular Malaysia.
Soo-Sum Lean, Denise E Morris, Rebecca Anderson, Ahmed Ghazi Alattraqchi, David W Cleary, Stuart C Clarke

Microbiologyopen· October 2025

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Prevalence of pneumococcal carriage and risk factors for pneumonia and carriage among under-5 children in Malaysia: findings from the MY-Pneumo study.
Hoomashini Gunasegaran, Nurul Hanis Ramzi, Andrew Chun Hoong Tan, Nur Alia Johari, Anna Marie Nathan, Stuart C Clarke

Pneumonia (Nathan)· October 2025

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Changes in carriage and serotype diversity of Streptococcus pneumoniae and other respiratory pathobionts in the UK between pre-PCV13 (2006-10), early-PCV13 (2010-12) and late-PCV13 (2012-23) periods.
David W Cleary, Rebecca Anderson, Jessica Jones, Rebecca A Gladstone, Karen L Osman, Stuart C Clarke

Pneumonia (Nathan)· September 2025

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Dysbiosis in the upper airway and gut, and altered urine metabolome in Malaysian diabetic patients.
Chin-Lee Ting, Zhi-Xian Kong, Nur Alia Binti Johari, Cindy Shuan-Ju Teh, Ivan Kok-Seng Yap, Stuart C Clarke

J Endocrinol· September 2025

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Whole-genome sequencing of clinical isolates from a tertiary hospital in Terengganu, Malaysia (2011-2020), revealed the predominance of the Global Clone 2 lineage.
Nurul Saidah Din, Farahiyah Mohd Rani, Ahmed Ghazi Alattraqchi, Salwani Ismail, Nor Iza A Rahman, Stuart C Clarke

Microb Genom· February 2025

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Non-pharmaceutical interventions for COVID-19 transiently reduced pneumococcal and carriage in a cross-sectional pediatric cohort in Southampton, UK.
David W Cleary, James Campling, Maria Lahuerta, Kyla Hayford, Jo Southern, Stuart C Clarke

Microbiol Spectr· August 2024

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Multicentre case-control study of pneumococcal infections among children with pneumonia in Peninsular Malaysia (MY-Pneumo): a study protocol.
Nurul Hanis Ramzi, Andrew Tan Chun Hoong, Nur Alia Johari, Anna Marie Nathan, Cindy Shuan Ju Teh, Stuart C Clarke

BMC Public Health· August 2024

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Respiratory carriage of hypervirulent Klebsiella pneumoniae by indigenous populations of Malaysia.
Souradeep Das, Anish K Pandey, Denise E Morris, Rebecca Anderson, Victor Lim, Stuart C Clarke

BMC Genomics· April 2024

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A brief history of and future prospects for pneumococcal vaccination in Malaysia.
Alex J J Lister, Evelin Dombay, David W Cleary, Lokman H Sulaiman, Stuart C Clarke

Pneumonia (Nathan)· August 2023

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Investigation of Upper Respiratory Carriage of Bacterial Pathogens among University Students in Kampar, Malaysia.
Hing Huat Ong, Wai Keat Toh, Li Ying Thong, Lee Quen Phoon, Stuart C Clarke

Trop Med Infect Dis· May 2023

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Comparative genomic epidemiology of serotype 3 IPD and carriage isolates from Southampton, UK between 2005 and 2017.
David W Cleary, Stephanie W Lo, Narender Kumar, Stephen D Bentley, Saul N Faust, Stuart C Clarke

Microb Genom· March 2023

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Lactoferrin modulates the biofilm formation and gene expression of methicillin-resistant .
Ramona Khanum, Pooi Yin Chung, Stuart C Clarke, Beek Yoke Chin

Can J Microbiol· February 2023

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Comparative genomic analysis of clinical Acinetobacter nosocomialis isolates from Terengganu, Malaysia led to the discovery of a novel tetracycline-resistant plasmid.
Farahiyah Mohd Rani, Soo Sum Lean, Nor Iza A Rahman, Salwani Ismail, Ahmed Ghazi Alattraqchi, Stuart C Clarke

J Glob Antimicrob Resist· December 2022

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Impact of bacterial strain acquisition in the lung of patients with COPD: the AERIS study.
Lucio Malvisi, Aparna Yarraguntla, Marie-Cécile Mortier, Karen Osman, David W Cleary, Stuart C Clarke

Infect Dis (Lond)· November 2022

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Changes in serotype prevalence of Streptococcus pneumoniae in Southampton, UK between 2006 and 2018.
David W Cleary, Jessica Jones, Rebecca A Gladstone, Karen L Osman, Vanessa T Devine, Stuart C Clarke

Sci Rep· August 2022

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The characterization of carried in the general population.
Denise E Morris, Karen L Osman, David W Cleary, Stuart C Clarke

Microb Genom· May 2022

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Draft Genome Sequences of Two Acinetobacter soli Clinical Isolates from a Tertiary Hospital in Terengganu, Malaysia.
Farahiyah Mohd Rani, Nor Iza A Rahman, Salwani Ismail, David W Cleary, Stuart C Clarke

Microbiol Resour Announc· April 2022

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Corrigendum: Pneumococcal vaccine impacts on the population genomics of non-typeable .
David W Cleary, Vanessa T Devine, Denise E Morris, Karen L Osman, Rebecca A Gladstone, Stuart C Clarke

Microb Genom· May 2021

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Serotype distribution of invasive, non-invasive and carried Streptococcus pneumoniae in Malaysia: a meta-analysis.
Alex J J Lister, Cheng Foh Le, Eddy Seong Guan Cheah, Mohd Nasir Mohd Desa, David W Cleary, Stuart C Clarke

Pneumonia (Nathan)· May 2021

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Carriage of upper respiratory tract pathogens in rural communities of Sarawak, Malaysian Borneo.
Denise E Morris, Hannah McNeil, Rebecca E Hocknell, Rebecca Anderson, Andrew C Tuck, Stuart C Clarke

Pneumonia (Nathan)· April 2021

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The upper respiratory tract microbiome of indigenous Orang Asli in north-eastern Peninsular Malaysia.
David W Cleary, Denise E Morris, Rebecca A Anderson, Jessica Jones, Ahmed Ghazi Alattraqchi, Stuart C Clarke

NPJ Biofilms Microbiomes· January 2021

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Complete Genome Sequencing of Acinetobacter baumannii AC1633 and Acinetobacter nosocomialis AC1530 Unveils a Large Multidrug-Resistant Plasmid Encoding the NDM-1 and OXA-58 Carbapenemases.
Ahmed Ghazi Alattraqchi, Farahiyah Mohd Rani, Nor Iza A Rahman, Salwani Ismail, David W Cleary, Stuart C Clarke

mSphere· January 2021

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Immune reconstitution in children following chemotherapy for acute leukemia.
Anthony P Williams, Jessica Bate, Rachael Brooks, Julia Chisholm, Stuart C Clarke

EJHaem· July 2020

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Disruption of the and Genes Attenuates Virulence: Towards the Development of a Live Attenuated Vaccine Candidate.
Malik Amonov, Nordin Simbak, Wan Mohd Razin Wan Hassan, Salwani Ismail, Nor Iza A Rahman, Stuart C Clarke

Vaccines (Basel)· April 2020

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Biocide susceptibilities and biofilm-forming capacities of Acinetobacter baumannii clinical isolates from Malaysia.
Muhammad Harith Nor A'shimi, Ahmed Ghazi Alattraqchi, Farahiyah Mohd Rani, Nor Iza A Rahman, Salwani Ismail, Stuart C Clarke

J Infect Dev Ctries· July 2019

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