Publications by authors named "Supratim Basu"

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Host-derived CEACAM-laden vesicles engage enterotoxigenic for elimination and toxin neutralization.
Alaullah Sheikh, Debayan Ganguli, Tim J Vickers, Bernhard B Singer, Jennifer Foulke-Abel, Supratim Basu

Proc Natl Acad Sci U S A· September 2024

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Host-derived CEACAM-laden vesicles engage enterotoxigenic for elimination and toxin neutralization.
Alaullah Sheikh, Debayan Ganguli, Tim J Vickers, Bernhard Singer, Jennifer Foulke-Abel, Supratim Basu

bioRxiv· July 2024

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Host-derived chimeric peptides clear the causative bacteria and augment host innate immunity during infection: A case study of HLB in citrus and fire blight in apple.
Supratim Basu, Elena Sineva, Liza Nguyen, Narattam Sikdar, Jong Won Park

Front Plant Sci· December 2022

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Enterotoxigenic Escherichia coli heat-labile toxin drives enteropathic changes in small intestinal epithelia.
Alaullah Sheikh, Brunda Tumala, Tim J Vickers, John C Martin, Bruce A Rosa, Supratim Basu

Nat Commun· November 2022

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Microbiome systems biology advancements for natural well-being.
Gargi Chatterjee, Sangeeta Negi, Supratim Basu, Joel Faintuch, Anthonia O'Donovan

Sci Total Environ· September 2022

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Two Liberibacter Proteins Combine to Suppress Critical Innate Immune Defenses in Citrus.
Supratim Basu, Loan Huynh, Shujian Zhang, Roel Rabara, Hau Nguyen

Front Plant Sci· May 2022

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Transcript profiling of stress-responsive genes and metabolic changes during salinity in indica and japonica rice exhibit distinct varietal difference.
Supratim Basu, Aryadeep Roychoudhury

Physiol Plant· December 2021

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Coping with inclement weather conditions due to high temperature and water deficit in rice: An insight from genetic and biochemical perspectives.
Roel C Rabara, Joseph Msanne, Supratim Basu, Marilyn C Ferrer, Aryadeep Roychoudhury

Physiol Plant· June 2021

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Rational design of antimicrobial peptides targeting Gram-negative bacteria.
Loan Huynh, Jeanette Velásquez, Roel Rabara, Supratim Basu, Hau B Nguyen

Comput Biol Chem· June 2021

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Using Network-Based Machine Learning to Predict Transcription Factors Involved in Drought Resistance.
Chirag Gupta, Venkategowda Ramegowda, Supratim Basu, Andy Pereira

Front Genet· June 2021

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Physiological and transcriptional responses to low-temperature stress in rice genotypes at the reproductive stage.
Gabriela Peres Moraes de Freitas, Supratim Basu, Venkategowda Ramegowda, Julie Thomas, Letícia Carvalho Benitez

Plant Signal Behav· March 2020

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Cold tolerance response mechanisms revealed through comparative analysis of gene and protein expression in multiple rice genotypes.
Gabriela Moraes de Freitas, Julie Thomas, Rohana Liyanage, Jackson O Lay, Supratim Basu

PLoS One· March 2020

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Engineering PGPMOs through Gene Editing and Systems Biology: A Solution for Phytoremediation?
Supratim Basu, Roel C Rabara, Sangeeta Negi, Pratyoosh Shukla

Trends Biotechnol· May 2018

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Regulation of grain yield in rice under well-watered and drought stress conditions by GUDK.
Venkategowda Ramegowda, Supratim Basu, Chirag Gupta, Andy Pereira

Plant Signal Behav· September 2016

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Plant adaptation to drought stress.
Supratim Basu, Venkategowda Ramegowda, Anuj Kumar, Andy Pereira

F1000Res· July 2016

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Analysis of Stress-Responsive Gene Expression in Cultivated and Weedy Rice Differing in Cold Stress Tolerance.
Caroline Borges Bevilacqua, Supratim Basu, Andy Pereira, Te-Ming Tseng, Paulo Dejalma Zimmer

PLoS One· May 2016

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Comparative analysis of gene expression in response to cold stress in diverse rice genotypes.
Gabriela Peres Moraes de Freitas, Supratim Basu, Venkategowda Ramegowda, Eugenia Bolacel Braga, Andy Pereira

Biochem Biophys Res Commun· February 2016

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Deciphering the role of various cis-acting regulatory elements in controlling SamDC gene expression in rice.
Supratim Basu, Aryadeep Roychoudhury, Dibyendu N Sengupta

Plant Signal Behav· April 2015

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Expression profiling of abiotic stress-inducible genes in response to multiple stresses in rice (Oryza sativa L.) varieties with contrasting level of stress tolerance.
Supratim Basu, Aryadeep Roychoudhury

Biomed Res Int· March 2015

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Rice GROWTH UNDER DROUGHT KINASE is required for drought tolerance and grain yield under normal and drought stress conditions.
Venkategowda Ramegowda, Supratim Basu, Arjun Krishnan, Andy Pereira

Plant Physiol· November 2014

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Coordinated regulation of photosynthesis in rice increases yield and tolerance to environmental stress.
Madana M R Ambavaram, Supratim Basu, Arjun Krishnan, Venkategowda Ramegowda, Utlwang Batlang

Nat Commun· October 2014

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Identification of trans-acting factors regulating SamDC expression in Oryza sativa.
Supratim Basu, Aryadeep Roychoudhury, Dibyendu N Sengupta

Biochem Biophys Res Commun· March 2014

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Application of stress indices for low temperature and deep sowing stress screening of rice genotypes.
Caroline Borges Bevilacqua, Daisy Ramirez Monzon, Eduardo Venske, Supratim Basu, Paulo Dejalma Zimmer

Pak J Biol Sci· November 2013

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Cross-talk between abscisic acid-dependent and abscisic acid-independent pathways during abiotic stress.
Aryadeep Roychoudhury, Saikat Paul, Supratim Basu

Plant Cell Rep· July 2013

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Carbohydrate content and antioxidative potential of the seed of three edible indica rice (Oryza sativa L.) cultivars.
Supratim Basu, Aryadeep Roychoudhury, Saptadwipa Sanyal, Dibyendu N Sengupta

Indian J Biochem Biophys· April 2012

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