Publications by authors named "Susan Coort"

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WikiPathways 2024: next generation pathway database.
Ayushi Agrawal, Hasan Balcı, Kristina Hanspers, Susan L Coort, Marvin Martens

Nucleic Acids Res· January 2024

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COVID-19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms.
Marek Ostaszewski, Anna Niarakis, Alexander Mazein, Inna Kuperstein, Robert Phair, Susan Coort

Mol Syst Biol· December 2021

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COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms.
Marek Ostaszewski, Anna Niarakis, Alexander Mazein, Inna Kuperstein, Robert Phair, Susan Coort

Mol Syst Biol· October 2021

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Ten simple rules for creating reusable pathway models for computational analysis and visualization.
Kristina Hanspers, Martina Kutmon, Susan L Coort, Daniela Digles, Lauren J Dupuis

PLoS Comput Biol· August 2021

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Tolerogenic effects of 1,25-dihydroxyvitamin D on dendritic cells involve induction of fatty acid synthesis.
Amadeo Muñoz Garcia, Emma L Bishop, Danyang Li, Louisa E Jeffery, Antje Garten, Susan L Coort

J Steroid Biochem Mol Biol· July 2021

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Transcriptomic changes in peripheral blood mononuclear cells with weight loss: systematic literature review and primary data synthesis.
Kaitlin Day, Aimee L Dordevic, Helen Truby, Melissa C Southey, Susan Coort

Genes Nutr· July 2021

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Blunted nutrient-response pathways in adipose tissue following high fat meals in men with metabolic syndrome: A randomized postprandial transcriptomic study.
Aimee L Dordevic, Susan L Coort, Chris T Evelo, Chiara Murgia, Andrew J Sinclair

Clin Nutr· March 2021

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WikiPathways: connecting communities.
Marvin Martens, Ammar Ammar, Anders Riutta, Andra Waagmeester, Denise N Slenter, Susan L Coort

Nucleic Acids Res· January 2021

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Integrated analysis of human transcriptome data for Rett syndrome finds a network of involved genes.
Friederike Ehrhart, Susan L Coort, Lars Eijssen, Elisa Cirillo, Eric E Smeets

World J Biol Psychiatry· December 2020

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Identification of microRNAs in skeletal muscle associated with lung cancer cachexia.
Wouter R P H van de Worp, Annemie M W J Schols, Anne-Marie C Dingemans, Céline M H Op den Kamp, Juliette H R J Degens, Susan Coort

J Cachexia Sarcopenia Muscle· April 2020

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CD11cMHC2 Macrophages Are a New Inflammatory and Dynamic Subset in Murine Adipose Tissue.
Suzan Wetzels, Mitchell Bijnen, Erwin Wijnands, José van de Gaar, Andika Tan, Susan Coort

Immunometabolism· April 2020

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Identification of Biological Pathways Contributing to Marbling in Skeletal Muscle to Improve Beef Cattle Breeding.
Zahra Roudbari, Susan L Coort, Martina Kutmon, Lars Eijssen, Jonathan Melius

Front Genet· February 2020

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Adipocyte abundances of CES1, CRYAB, ENO1 and GANAB are modified in-vitro by glucose restriction and are associated with cellular remodelling during weight regain.
Qi Qiao, Freek G Bouwman, Marleen A van Baak, Nadia J T Roumans, Roel G Vink, Susan L M Coort

Adipocyte· December 2019

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Network Analysis of Genome-Wide Association Studies for Chronic Obstructive Pulmonary Disease in the Context of Biological Pathways.
Sarah Mount, Elisa Cirillo, Kelly Stewart, Susan Coort, Chris T Evelo

Am J Respir Crit Care Med· December 2019

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Prader-Willi syndrome and Angelman syndrome: Visualisation of the molecular pathways for two chromosomal disorders.
Friederike Ehrhart, Kelly J M Janssen, Susan L Coort, Chris T Evelo, Leopold M G Curfs

World J Biol Psychiatry· November 2019

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CyTargetLinker app update: A flexible solution for network extension in Cytoscape.
Martina Kutmon, Friederike Ehrhart, Egon L Willighagen, Chris T Evelo, Susan L Coort

F1000Res· November 2019

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A bioinformatics workflow to decipher transcriptomic data from vitamin D studies.
Amadeo Muñoz García, Lars M Eijssen, Martina Kutmon, Chaitra Sarathy, Ardi Cengo, Susan L Coort

J Steroid Biochem Mol Biol· May 2019

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Biological Pathways Leading From ANGPTL8 to Diabetes Mellitus-A Co-expression Network Based Analysis.
Amnah Siddiqa, Elisa Cirillo, Samar H K Tareen, Amjad Ali, Martina Kutmon, Susan L Coort

Front Physiol· December 2018

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Role of 1α,25-Dihydroxyvitamin D3 in Adipogenesis of SGBS Cells: New Insights into Human Preadipocyte Proliferation.
Ingrid Felicidade, Daniele Sartori, Susan L M Coort, Simone Cristine Semprebon, Andressa Megumi Niwa

Cell Physiol Biochem· September 2018

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Differential protein expression of hippocampal cells associated with heavy metals (Pb, As, and MeHg) neurotoxicity: Deepening into the molecular mechanism of neurodegenerative diseases.
Venkatanaidu Karri, David Ramos, Julia Bauzá Martinez, Antonia Odena, Eliandre Oliveira, Susan L Coort

J Proteomics· September 2018

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From SNPs to pathways: Biological interpretation of type 2 diabetes (T2DM) genome wide association study (GWAS) results.
Elisa Cirillo, Martina Kutmon, Manuel Gonzalez Hernandez, Tom Hooimeijer, Michiel E Adriaens, Susan L Coort

PLoS One· July 2018

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Pathway analysis of transcriptomic data shows immunometabolic effects of vitamin D.
Amadeo Muñoz Garcia, Martina Kutmon, Lars Eijssen, Martin Hewison, Chris T Evelo, Susan L Coort

J Mol Endocrinol· February 2018

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WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research.
Denise N Slenter, Martina Kutmon, Kristina Hanspers, Anders Riutta, Jacob Windsor, Susan L Coort

Nucleic Acids Res· January 2018

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Sexual Dimorphism, Age, and Fat Mass Are Key Phenotypic Drivers of Proteomic Signatures.
Aoife M Curran, Colleen Fogarty Draper, Marie-Pier Scott-Boyer, Armand Valsesia, Helen M Roche, Susan L Coort

J Proteome Res· November 2017

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Visualizing the regulatory role of Angiopoietin-like protein 8 (ANGPTL8) in glucose and lipid metabolic pathways.
Amnah Siddiqa, Elisa Cirillo, Samar H K Tareen, Amjad Ali, Martina Kutmon, Susan L Coort

Genomics· October 2017

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