Publications by authors named "Susan Schroeder"

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The mRNA covalent modification dihydrouridine regulates transcript turnover and photosynthetic capacity during plant abiotic stress.
Li'ang Yu, Giovanni Melandri, Anna C Dittrich, Sebastian Calleja, Bruno Rozzi, Susan J Schroeder

bioRxiv· November 2025

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Nanopore Direct RNA Sequencing Reveals Virus-Induced Changes in the Transcriptional Landscape in Human Bronchial Epithelial Cells.
Dongyu Wang, J Leland Booth, Wenxin Wu, Nicholas Kiger, Matthew Lettow, Susan J Schroeder

bioRxiv· June 2025

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: A Long Noncoding Cis-Natural Antisense RNA That Plays a Role in the Regulation of the Cold Response of .
Nicholas M Kiger, Susan J Schroeder

Noncoding RNA· November 2024

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Insights into nucleic acid helix formation from infrared spectroscopy.
Susan J Schroeder

Biophys J· January 2024

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Plant Single-Cell/Nucleus RNA-seq Workflow.
Sandra Thibivilliers, Andrew Farmer, Susan Schroeder, Marc Libault

Methods Mol Biol· December 2022

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Nearest neighbor rules for RNA helix folding thermodynamics: improved end effects.
Jeffrey Zuber, Susan J Schroeder, Hongying Sun, Douglas H Turner, David H Mathews

Nucleic Acids Res· May 2022

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Biophysicists' continued outstanding response to COVID-19.
Tamar Schlick, Eric J Sundberg, Susan J Schroeder, M Madan Babu

Biophys J· July 2021

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Biophysicists' outstanding response to Covid-19.
Tamar Schlick, Eric J Sundberg, Susan J Schroeder, M Madan Babu

Biophys J· March 2021

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Perspectives on Viral RNA Genomes and the RNA Folding Problem.
Susan J Schroeder

Viruses· October 2020

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Challenges and approaches to predicting RNA with multiple functional structures.
Susan J Schroeder

RNA· December 2018

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The Influence of Angler Values, Involvement, Catch Orientation, Satisfaction, Agency Trust, and Demographics on Support for Habitat Protection and Restoration Versus Stocking in Publicly Managed Waters.
Susan A Schroeder, David C Fulton, Eric Altena, Heather Baird, Douglas Dieterman

Environ Manage· October 2018

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Surprising Sequence Effects on GU Closure of Symmetric 2 × 2 Nucleotide RNA Internal Loops.
Kyle D Berger, Scott D Kennedy, Susan J Schroeder, Brent M Znosko, Hongying Sun

Biochemistry· April 2018

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Crumple: An Efficient Tool to Explore Thoroughly the RNA Folding Landscape.
Ivan Guerra, Susan J Schroeder

Methods Mol Biol· January 2018

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Swellix: a computational tool to explore RNA conformational space.
Nathan Sloat, Jui-Wen Liu, Susan J Schroeder

BMC Bioinformatics· November 2017

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Stack Locally and Act Globally: A Few Nucleotides Make All the Difference in Enterovirus 71 IRES Binding hnRNAP A1 and Infectious Phenotypes: Commentary on "HnRNP A1 Alters the Structure of a Conserved Enterovirus IRES Domain to Stimulate Viral Translation".
Susan J Schroeder

J Mol Biol· September 2017

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Advancing viral RNA structure prediction: measuring the thermodynamics of pyrimidine-rich internal loops.
Andy Phan, Katherine Mailey, Jessica Saeki, Xiaobo Gu, Susan J Schroeder

RNA· May 2017

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Thermodynamic stabilities of three-way junction nanomotifs in prohead RNA.
Alyssa C Hill, Susan J Schroeder

RNA· April 2017

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NMR Structures and Dynamics in a Prohead RNA Loop that Binds Metal Ions.
Xiaobo Gu, Sun-Young Park, Marco Tonelli, Gabriel Cornilescu, Tianbing Xia, Susan J Schroeder

J Phys Chem Lett· October 2016

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Prohead RNA: a noncoding viral RNA of novel structure and function.
Alyssa C Hill, Laura E Bartley, Susan J Schroeder

Wiley Interdiscip Rev RNA· July 2016

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A parallel implementation of the Wuchty algorithm with additional experimental filters to more thoroughly explore RNA conformational space.
Jonathan W Stone, Samuel Bleckley, Sean Lavelle, Susan J Schroeder

PLoS One· January 2016

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Structures and Energetics of Four Adjacent G·U Pairs That Stabilize an RNA Helix.
Xiaobo Gu, Blaine H M Mooers, Leonard M Thomas, Joshua Malone, Steven Harris, Susan J Schroeder

J Phys Chem B· October 2015

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Probing viral genomic structure: alternative viewpoints and alternative structures for satellite tobacco mosaic virus RNA.
Susan J Schroeder

Biochemistry· November 2014

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Supervisor Training Makes a Difference with a Tough Issue.
Chris O'Neill, Susan Schroeder

Nurse Lead· April 2014

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Keeping baby safe: a randomized trial of a parent training program for infant and toddler motor vehicle injury prevention.
Lynne Swartz, Ann Glang, David C Schwebel, E Gwen GeigerWolfe, Jeff Gau, Susan Schroeder

Accid Anal Prev· November 2013

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Public lakes, private lakeshore: modeling protection of native aquatic plants.
Susan A Schroeder, David C Fulton

Environ Manage· July 2013

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